Lates calcarifer (barramundi perch): 108886796
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Entry
108886796 CDS
T04895
Symbol
ntn2
Name
(RefSeq) netrin 2 isoform X1
KO
K06843
netrin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108886796 (ntn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108886796 (ntn2)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108886796 (ntn2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
108886796
NCBI-ProteinID:
XP_018537350
UniProt:
A0A4W6BN83
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All DBs
Position
LG23:complement(7843858..7885817)
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AA seq
631 aa
AA seq
DB search
MREPWRCLLGLCLLACSVSTHSAANPFAGQQTPLDPCYDDTGAARRCIPEFINAAFGKEV
MVSSVCGRPPSRSCSVVERGDDRPSVRTCQICDAADPRRAHPASYLTDLNSAHNLTCWQS
ENLNTSPYNVTLTLSLGKKFEITYVSLQFCSPRPESLAIYKSMDYGKTWMPYQFYSSQCR
RMYNRPNKATITKQNEQEALCTDGHTDLYPLSGGLIAFSTLDGRPSGKDFDNSPVLQDWV
TVTDIRVVFNRPQLPRELGLGAGGSNSDDPASVTSTLATYFYAVGDFQVGGRCKCNGHAS
RCLKDKEGKLVCDCKHNTEGPECDRCKPFHYDRPWQRANAREANECLPCNCNLHARRCRF
NMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMARPITHRRACKACDCHPVGAA
GKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPVAPCIKIPVANPTAVVSSTEEPADC
ESYCKPVKGNLKINMKKYCKKDYAVQVNVLDMETVGDWAKFSVSVVSVYKSRGEPLKRGD
NILWVHMKDLACKCPKIQMSKRFLVMGGSDGGTGTGTGTGVGPGGGAASPGAERVGLVAD
KNSLVIQWRDVWTRRLRKFQRKEKKGKCSKA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaccctggaggtgcctgctgggcctgtgcctcctggcatgctcggtctccacc
cacagtgctgccaatcccttcgcggggcagcagaccccactggacccttgctatgacgac
acaggtgcagcccgccgctgcatccccgagtttatcaacgccgcctttggtaaggaggtg
atggtgtccagcgtctgcggccggcctccgtcccgttcgtgcagcgtggtggagcgggga
gacgaccggccttccgtgcgcacgtgtcaaatctgtgacgcggctgaccctcgccgcgcc
caccctgcttcctacctcaccgacctcaactcagcccacaaccttacctgttggcagtca
gagaatctgaacacctcgccgtacaatgtgactctcaccctttcattaggaaaaaagttt
gagatcacctatgtcagcctgcagttctgttctccaagacctgagtccctggccatttac
aagagcatggactacggcaaaacctggatgccataccagttctactcctcgcagtgccgg
cgtatgtataatcggcccaacaaagcaaccattaccaagcagaacgagcaggaggctcta
tgcacagatggccacactgacctctacccactctctggaggactcattgctttcagcact
ctggatggacggccctctggtaaagactttgacaacagcccagtccttcaggactgggtg
accgtcaccgacatccgtgttgtcttcaaccggccccagctgccccgggagctgggactg
ggggctgggggcagcaacagcgatgaccctgcgtcggtgacatcgacactggcaacttat
ttctacgcagtgggagacttccaggtgggcgggaggtgtaaatgcaatggacatgcctca
cgctgcctgaaagacaaggaaggcaaactggtgtgcgactgcaaacacaacacagaaggg
cctgaatgtgaccgctgcaagcccttccactatgaccgaccgtggcagagggccaatgcc
cgggaggccaacgagtgcctaccatgcaactgtaaccttcacgcccgccgctgcagattt
aacatggagctgtacaagctatcggggaggaagagcggaggagtctgcatgaactgccgc
cacaacactgcaggacgccactgccactactgcaaggagggcttttacagagacatggcc
aggccgatcactcaccgtcgagcctgcaaagcctgtgactgccaccctgtgggtgcagcg
ggcaagacgtgcaaccagaccacgggccagtgcccctgcaaagacggcgtcaccggcatc
acctgcaaccgctgcgccaagggctaccagcagagccgctcacctgtggccccgtgcatc
aaaatcccagtggccaaccccacagctgtggtgagcagcacagaggaaccagcagattgc
gagtcctattgtaaaccagtgaagggcaaccttaagatcaacatgaagaaatattgcaag
aaagattatgcggtccaagtgaatgtcctggacatggagacagtgggggactgggccaag
ttctcagttagcgtggtctctgtgtacaagagtcgcggcgagcctttgaaacgaggcgac
aacatcctgtgggtgcacatgaaggacctagcctgcaaatgccccaagatccagatgagc
aaacgattcctggtgatgggcggcagcgatggcgggacgggcacggggacggggacaggg
gtcggccctgggggtggagccgccagcccgggcgcggagcgtgtgggcctggtggccgat
aagaacagcctggtgatccagtggagggacgtttggacgagacgcctgaggaagttccag
cgcaaagagaagaagggaaagtgcagcaaagcgtga
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