Lates calcarifer (barramundi perch): 108886819
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Entry
108886819 CDS
T04895
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3
KO
K12485
Rab11 family-interacting protein 3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108886819 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108886819 (rab11fip3)
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
108886819 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
108886819
NCBI-ProteinID:
XP_050922511
UniProt:
A0AAJ8DKW0
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Position
LG23:7541447..7570567
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AA seq
1106 aa
AA seq
DB search
MEPTVLSGPLGHAQWDSDQPFPLGFHTLDSDNGGVLCQSKSGQTGLDFRDSDQDQTSQHS
DRDKVFQNMPVVLDNLLNISDFSCGDLQFEADQSTISKASLHSTHLEELSCTEKTEGPDE
ISDCTLSWLFPPNLTDVVGKNSTCEELNLTQEAPLEGSDAVSSQAELISLSVPVSPSKIS
ERNPETNIGDPFLLVDLLSNEPPCLPPESSGEFNPQGVSEELVDLSQEEQAGLPPSQSRE
TLSPETEDKGLFPDQVTDLPVTSSTTLQGLPENCSSQNHLSAPLEFFKGSVPLLDLEVPD
CDSSLSLCPASPASVFGTGARLHLSAEESEVEHARATVIRNLTSELQGEDDSFALGLSAE
PSSLTVPLAEDAFIQGDFTSESCSAENVSKDLMEDNICSEAKNQGNEEMALDLCLTADEV
HDEETWDLKPQEGVQSGNVPDPTTEQREEKNTIDTNQLEGSDCHEVTSFDFSVQDLNTSS
PEAGWTSEQTVETISLSKMVVDDSLPMVSAVNTREEDVSPLKAVFDALDQDGDGFVRIEE
FMEFAAAYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGPEPQLYNVNYSPGDGA
VGCPEEYDEQNEVTDSAYLGSESTYSECETFTDEDTGALVPPEMHEDVETDSGIEATLHD
PEDGGNRSVFSLNSELHNHSLVTVIGGEEEHFEDFGESNTSELLLESSVGGDRGAERLPS
RAAPGAGQWLRTTFSQSFLREEALDFFCSQCHKQISRLEDLSTRLNFLEMTSAGKRLSSK
KVARHLLQNSSMTLDTMSDLTRDILELADNDITDKVLLLERRVAELEKESEASGEQHTRL
RQENLQLVHRANALEEQLKEQELHADEQLQQETRRHKEALSKLERERGLELENLQARLQQ
LDEENSELRSCVPCLRANIERLEEEKRKLQDETEAMSDRLNDEMESRRKMSDKLSHERHQ
SQKEKECTQELIEDLRKQLEHLQLYKLEAEAKRGRSPGAGLQEYQTRTREAELEQEIKRL
KQDNRSLKEQNDELNGQIINLSIQGAKNLMSASFSDSLAAEINSVSRAELMEAIHKQEEI
NYRLQDYIDKIIVAIMESNPSILEVK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgacagttctgtcaggccctttggggcacgcacagtgggactcagaccagcca
tttcctcttggatttcacacactggattcagacaatggaggtgtgctctgtcaaagcaag
agtggccagacaggtttggatttcagagacagtgaccaggatcaaacatcccaacacagt
gacagagataaggttttccagaacatgcctgtagtgctggacaacctcctaaatatctca
gatttcagttgtggggatttgcagtttgaggcagatcagtctacaatttccaaagcctct
ctccatagtactcatttagaggaattatcttgcacagaaaaaactgagggacctgatgaa
atcagtgactgtactttatcatggttatttcctcccaacctcactgatgtggttggaaaa
aactctacctgcgaggaactgaatctgacacaggaggcccctcttgagggctcagatgcc
gtcagtagtcaggctgagctaataagcctcagtgtacctgtctctccatcaaagatttct
gagaggaatccagagaccaacataggggatccatttttgttggtagatctcctctcaaat
gaacctccttgtctgcccccagagtcttcaggtgagtttaacccacagggtgtcagtgag
gagctggtggacctgtcacaagaggagcaggcgggcctccctccctcacagagcagggag
actttgtcacctgaaactgaagacaaaggtttattccctgatcaagtgactgatctgcct
gtaaccagtagcactaccctgcaaggtctgcctgagaactgctcctcacaaaatcacctc
agcgcaccactggagtttttcaaaggatctgtgcctttgttggatttagaggttccagat
tgtgacagcagtctgagcctgtgcccagccagtcctgcttctgtttttggcacaggtgcg
cggttacatttatcagctgaggagtcagaggtggaacatgcaagagctactgtaattaga
aatctgacttcagaactacaaggtgaggatgactcatttgctctgggtttgtcagctgaa
ccttcatcactgacagtgcctctggctgaagatgccttcatccagggtgatttcaccagt
gagagttgctctgcagagaatgtgtctaaggatttgatggaagacaacatttgctctgaa
gccaaaaatcaggggaatgaggaaatggctttagatctgtgcttgactgctgatgaggtc
catgacgaggaaacttgggacttgaaaccacaggagggtgtacagagtggcaatgttcct
gatccaacaaccgaacagagggaagagaagaacacgatagacactaaccagctggaggga
tcagattgtcatgaagtcacttcttttgatttttcagttcaggacttaaacacttcttct
cctgaggctggatggactagtgagcaaactgtggagacaatttccctctctaagatggtg
gtagatgactcactgccaatggtttcagctgtgaacacaagggaggaagatgtctcccca
ctgaaagctgtattcgacgctttagaccaagatggggatggctttgttcggattgaggag
tttatggagtttgctgctgcctatggggctgatcaggtgaaggatctgaccaagtttttg
gatcccagtggcctgggagtgatcagctttgaagacttccaccgtggaatctctgcaatt
agcaatggaggcccagagccacagctctacaatgtaaactacagtccaggggatggagct
gtgggctgtccagaggaatacgatgagcaaaatgaggtgaccgacagtgcatacctgggc
tccgagagcacatacagtgagtgtgagaccttcactgatgaggacacaggggccctcgta
ccacccgagatgcatgaggacgtggagacggacagtggcatcgaggccacactgcacgat
cccgaggatggcggaaataggtctgtgttttccctgaactctgagctccataaccactcc
ctagtgacggtcatcggtggagaggaggagcactttgaggactttggggaaagtaatacc
tcagagttgctactggagagcagcgtaggaggggacagaggggcagagcgactcccctct
cgtgcagcccctggagcaggtcaatggctccgcactactttctcccagagcttcctcagg
gaggaggcgctggactttttctgtagccagtgtcacaaacaaataagtcgtcttgaggac
ctctccacccgcctcaatttcctagagatgactagcgctggcaagaggctgtctagcaag
aaagtagcaagacatctcctccagaacagctcaatgactctggacaccatgagcgactta
acgcgggacatcctggagcttgctgacaacgacatcacagacaaggtgctcctgcttgag
cgtcgggtggctgagttggagaaggagtcggaggcctcgggagagcagcacacacggctg
cgccaggagaaccttcagctggtgcaccgggccaatgccctggaggagcaactgaaggag
caggagctccacgctgacgagcaactacagcaagagacacgtcgccacaaggaggccctg
agcaaactggagagagagagggggctggagctggaaaacctgcaggctaggttgcagcag
ctggacgaggagaacagtgagctgcggtcctgtgttccttgtctacgggcaaacatcgag
agactagaggaggagaagaggaagctgcaagatgagacagaggccatgtctgacagactg
aacgacgagatggagtcccgcaggaagatgagcgacaagctgagccacgagcgccatcag
agtcagaaggagaaggagtgcacgcaggagctgattgaagacttacgtaaacagctcgag
cacctacagctatacaagttggaggctgaagcaaagagagggcgctcacccggcgcaggg
ctgcaggaatatcagacccgcacccgcgaagccgagctggaacaggagatcaaacgactc
aaacaggacaaccgcagcctgaaggagcagaacgacgagctaaacggacagattatcaac
cttagcatccagggggccaaaaacctgatgtcggcctccttctctgactccctggcagct
gaaatcaactctgtgtctcgtgcagagctgatggaggctatccataaacaggaggagatc
aactacagactccaggattacatcgacaaaatcatcgtggccatcatggagtccaacccc
tccatcctagaggtcaaatag
DBGET
integrated database retrieval system
