Lates calcarifer (barramundi perch): 108886874
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Entry
108886874 CDS
T04895
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04217
Necroptosis
lcf04620
Toll-like receptor signaling pathway
lcf04621
NOD-like receptor signaling pathway
lcf04622
RIG-I-like receptor signaling pathway
lcf04623
Cytosolic DNA-sensing pathway
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108886874
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108886874
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108886874
04621 NOD-like receptor signaling pathway
108886874
04622 RIG-I-like receptor signaling pathway
108886874
04623 Cytosolic DNA-sensing pathway
108886874
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108886874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108886874
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Interferons
108886874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
FEZ
TetR_C_5
Motif
Other DBs
NCBI-GeneID:
108886874
NCBI-ProteinID:
XP_018537477
UniProt:
A0A4W6CI59
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MLNRILFVCLFLALYSAGSSLSCRWMDHKFRQYSENSLDLLDTMVNNSTNSTEDAEVEDT
VAFPNDLYSQASKASAEDKLGFTVQVLEEMAVLFEEDHSAASWEESTVKDFVNIVTQQAD
GLHSCTGSHSHKKKNKKLHMYFKRLSGHVLERMGHSAESWELIRKKIKTHLMRAHQLVSS
LLTTN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaggattttgtttgtttgcctgtttctggctctgtacagtgcaggctcctca
ctgagctgcaggtggatggatcataaattcagacagtacagtgaaaactctttggatcta
ctagataccatggtgaataattccactaacagcactgaggatgctgaagtggaggacact
gtggccttccctaatgatctgtacagccaggcgtccaaagcatcagctgaggataaactt
ggtttcacagtgcaggttctggaggagatggccgtcctgtttgaggaggatcacagcgct
gcatcatgggaggagagcacagtgaaggactttgtcaacattgtgacccagcaggctgac
ggccttcactcctgtactgggagccacagccacaagaagaagaacaagaagctgcacatg
tatttcaagagactgtcaggccacgtcctagaacgaatgggccacagtgctgaatcctgg
gagctgatcaggaagaaaatcaaaacccatttaatgagagctcaccagctggtttcatct
ctgctcaccaccaactaa
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