KEGG   Lates calcarifer (barramundi perch): 108886881
Entry
108886881         CDS       T04895                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108886881
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108886881
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    108886881
SSDB
Motif
Pfam: LLGL Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st WD40 Beta-prop_RIG_2nd Beta-prop_WDR5 WD40_Prp19 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_VPS8 Lgl_C Beta-prop_DCAF4 Synaptobrevin Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_EML
Other DBs
NCBI-GeneID: 108886881
NCBI-ProteinID: XP_018537488
UniProt: A0A4W6DEA9
LinkDB
Position
LG1:complement(11752614..11868721)
AA seq 1268 aa
MKKFRKVLDGLTTSSPGGTIGSPSCGSAAGTPTAAPTPKEIDVQETLVSENFQLCKTVRH
GFPYQPTALAFDPVQKILAVGSRSGGIRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQWDLRGKKADFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTLWNLRNTTKPFQVTFPHGKIQKDGRKESCKPI
LKVEYKTSRSSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMVLCETPY
NNEVQEPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDIIPI
LYSIGAKHKKTGYSQKEWPISGGTWTLGSHTYPEIIITGHADGSIKFWDASAITLQMLYK
LKTSKVFEKPKPGEGRAAELVEEDPFAVQMVSWCPQSRIFCVVGISAHIILYRFSKYDAN
TQIVSLEVRLQCESEDVISPSENENNPCFSDPGSHSPQPHHQHPASPSSGTPEGIKNSIP
CLKVKDRVVRVPPGYQAELVIQLLWVDGEPPQQITSLDINSAYGLLAFGNCNGLAVVDYL
QKTILLCMSTLDLYGPADPYQRLTRSPRRNRQSTSEFCMRGLSNFYSDSKKRIRTSYQSL
TELSDNQQSIDMERSKSPTSVHYPTSLHNDPRILPEPVASLRASHCSPVFYLLDNVKGPG
RKLSLPTDLKTDLDHVNGHCTSPTSQPCSAGKPRVPMGPEGPRLTRRGPGRPPFRKAQSA
ACMEISLPVSHTEGYASRRAMLQQLHGVTMYSHDEHHTTSPYCWSERESRENSFSRSRSS
SVSSIDRDTKEAITTLQFGESYGRKSDALPTPCLWVGTSLGVVLLIPMSIPTDQEERMEE
PVTIGPSGAVLMLKGSVLRFGFLDCMGVLIQSPYEVWRDLNASEDPDRPRRRKLVHFSPS
SSQDACGDGHLAVVCSERQAKVFLMPSQSCLFVHNITESSFVLRADVVSVCNSVSLACFC
ANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMC
DNLQEMLGELFTPIETPEAQNRGFLKGFFGGNAHTFDREELFGEAAAGKASRSLAQHIPG
QAGVEGMKVAASGAVGELARARIALDERGQRLGELEERTALMMTSAETFSKHAHELMLKC
KDKKWYQF
NT seq 3807 nt   +upstreamnt  +downstreamnt
atgaagaagtttcggaaggtgttggacggcttgaccacctcttcgccgggagggactatc
ggatccccatcgtgcggcagcgcggcagggactcccacagcggcgccaactcccaaggaa
atcgacgtccaagagacgctagtgtcggaaaactttcagctgtgtaagacagtgcgtcat
ggtttcccttaccagcccactgctttggcctttgaccctgtgcagaagatcttggctgtt
ggctcgagatcaggcggcatacggatactgggacgacctggggtggactgctactgtcag
catgagagcggagcagctgttcttcaactgcagttcctcatcaatgagggagcgctggtc
acagcctgtgcagatgacacgttacacttgtggaatttgcggcagaggcgaccggctatc
ctccattcactcaaattcaacagagagaggatcacgttttgccaccttccctttcagagt
aaatggctgtatgtggggacagaacgcggcaatacacacatcgtcaacatcgagtcattc
attttgtctggatatgtcatcatgtggaacaaggccattgaactatcaactaagactcat
ccaggacctgtggttcatttgagcgacagcccaaaggatgaaggcaagctgcttataggg
tttgagagtgggacaattgtacagtgggatctccggggcaagaaggccgacttcagaatc
tactatgatgaggccatccactcagtcagctggcatcatgaagggaaacagttcatgtgc
agtcactcagacggcagcctgacgctgtggaacctcagaaacaccaccaagccattccag
gtcaccttccctcatggaaagatacagaaggatgggaggaaggagtcatgtaaacccata
ctcaaagtggagtacaagacatcaaggagcagcgagccttttgttatcttctctgggggt
ctttcatatgacaaggcaggacggcgaccaacattaaccatcatgcatggcaaagccatc
actgtgctcgagatggactatcctattgtagagttcatggtgctctgtgagactccttac
aacaatgaggttcaggagccttatgcagtggtagtgcttctggaaaaggacttaattgtg
gtggatctgacacagagcaacttccctgtctttgagaacccttatcccatggacatccat
gagtctccagttacctgcacagcctattttgcagactgtccacctgacattatccccatc
ctttactctataggagctaaacacaagaagactggttacagccaaaaggagtggccaatc
agtggaggaacatggacgttaggctcccacacctatccagagatcatcatcacaggacat
gctgacggatcaattaagttctgggacgcatctgcaatcacgctgcagatgttgtacaag
ctgaagacctccaaagtgtttgagaaaccaaagccaggtgagggccgtgccgccgagttg
gtggaggaagacccctttgctgttcagatggtcagttggtgccctcagagtcgcatcttc
tgtgtggttggcatctcagcccacatcatcctgtatcgattcagtaaatacgatgccaac
actcagatagtgtcattagaggtacgcctgcagtgtgagtcagaagatgtcatctcccca
tcagaaaatgaaaacaatccctgcttctcagatcctggctcccactcaccccaaccacac
catcaacacccagctagccccagcagtggaacaccagagggtatcaaaaacagcatcccc
tgcctcaaagtgaaggaccgggtggttcgtgtcccccctggctaccaggcagagctggtc
attcagctactgtgggtagatggagaacctccacaacagatcaccagcctggacatcaac
tctgcctatggccttttggcatttgggaactgtaatggcctagcggtggtggactacttg
cagaaaaccattctgttgtgtatgtcgacactggatctatacggacctgccgatccctac
cagcgccttacccgctccccacgcaggaacagacagtccacctcagagttttgcatgcgt
ggcctgtctaacttttattcagattcaaagaaaaggatccgtacatcctaccagagtctt
actgaactctctgacaaccagcagtccattgacatggagagaagcaagtcgccaacttca
gttcattacccaacctcccttcacaatgacccacgcatcctgccagagcctgtggccagt
ctgagagccagccactgcagtccagtcttttacttactggacaatgtaaagggacccggc
agaaagttaagtctgccaacagatcttaagactgatcttgatcatgtcaatggacattgc
actagccccacctcccagccctgctcggcggggaagcctcgagtcccaatgggtcccgag
ggaccacggcttacccgcagaggccctggccgaccgcccttccgcaaggcccagtctgct
gcttgcatggagatctctttgcctgtgtcccacactgaaggttatgcatccaggagggca
atgcttcagcagttacacggagtcactatgtactcccacgatgagcaccacaccaccagc
ccctactgctggagtgagagagagagtcgtgaaaactccttcagccgctcgcgcagttcc
agtgtgtccagcattgaccgagacaccaaagaggctatcaccacactgcagtttggggag
tcctatgggcgcaagagtgatgccctgcccaccccatgtttgtgggtgggcaccagctta
ggcgtggtcctgctcatcccaatgtccattcccactgaccaagaggagagaatggaggaa
cctgtcaccattggccccagtggagcagtcttgatgctgaagggctctgtgttgcgcttt
ggtttcttggactgcatgggagtgctcattcagagcccctacgaggtttggcgagacctc
aatgcctctgaggaccctgaccgaccgcgaagacgcaagctggtccacttttccccatca
tcctcccaggatgcctgcggagatgggcacttggctgtagtgtgctcggagaggcaggcc
aaagtatttttgatgccctcgcagtcttgcctctttgtccacaacatcacagagtcatca
tttgtactgagagctgacgtggtgtctgtgtgtaacagcgtcagcttggcctgcttttgt
gcaaatggccacgtcatgacactcagtttgcccagtctaagaccgctgatggatgtcaat
tacctgcctctgacagacatgcgcattgcaagaaccttttgcttcaccaatggggggcag
gcattataccttagctccccaacagagatccagagaattacatacagccaggagatgtgt
gacaatctgcaggaaatgctgggagagctgtttacaccaatagaaacaccagaagcccag
aacagaggctttctaaagggcttctttggaggaaacgcccataccttcgacagagaggag
ctctttggtgaggcagcagctgggaaggcgtcccgcagtctggcgcagcacatccctggg
caggcgggggtggagggcatgaaggtggcggcaagtggagccgtgggggagctggctcga
gcccgcattgctctggatgagagaggccagagactgggggagctggaggaacgaactgcc
ctcatgatgaccagtgcagaaaccttctccaagcacgctcatgagctgatgctaaagtgc
aaggacaagaagtggtaccagttctaa

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