Lates calcarifer (barramundi perch): 108886966
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Entry
108886966 CDS
T04895
Name
(RefSeq) voltage-dependent calcium channel gamma-6 subunit
KO
K04871
voltage-dependent calcium channel gamma-6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108886966
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108886966
04261 Adrenergic signaling in cardiomyocytes
108886966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108886966
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108886966
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GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
108886966
NCBI-ProteinID:
XP_018537643
UniProt:
A0A4W6FNL3
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Position
LG3:complement(20854812..20865494)
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AA seq
287 aa
AA seq
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MWSTFFVTDEEGRTVGPAAAGTVGGAAPGGAAQGAGGLASLMSGRSTFGGNKRRRTTSTG
HTMSEAQEGKIKLAFFVAIVGVVLTVLGVGTEFWVELAPPKSFYNNQTCLTAHYGLWKGC
TKTLWVADIDPERESCGPAELPGESNCTYFKFFTTGENAVMFQKTTQKNLNVVAAMLALF
SLFLMVMGAICITMSLSKEILFFLKPASVCFILSGVLVLLSLMVFHQSVLAFLASDHTVP
LHHELSWSVSCIGCAGAVLIIGGILFLLLALPYSPWQRCLPQKNSSS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctaccttttttgtgactgacgaggagggccgcacggtgggcccggcggcagca
ggaacagtgggaggggctgcacctgggggagcagcccagggtgcagggggtctggccagc
ctgatgagcggacgcagcacgtttggggggaacaagcgccgccggacaacgtcaacagga
cacaccatgagtgaggcccaggagggaaagatcaagttggcgttctttgtggccatcgtg
ggcgtcgtccttactgtgctcggggtggggacagagttctgggtggagctagcacccccg
aagagtttctacaacaatcagacatgtctgacagctcactatggcctgtggaagggctgc
accaagaccctgtgggtggctgatatcgacccagagagagaaagctgtggacctgctgaa
ctgcccggagaatcaaactgcacctacttcaagttcttcaccacgggggaaaatgctgtg
atgtttcagaagacaacgcagaagaatctgaatgtagtggcagccatgttggccctgttc
agcctgttcctcatggtaatgggggccatatgcatcaccatgtctctcagtaaagaaatc
ctgttcttcctcaagccagcatcagtctgcttcattctgtcaggtgtcctggtgcttctc
tctctcatggttttccaccagtcagtcctggctttcctggccagcgaccacacggttcct
cttcaccacgagctgtcctggtcagtgtcgtgtattggctgtgcgggggccgtcctgatc
ataggtgggatcctcttcctgctgctggcacttccctacagcccctggcagaggtgtctc
cctcagaagaacagcagcagctag
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