Lates calcarifer (barramundi perch): 108886979
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Entry
108886979 CDS
T04895
Name
(RefSeq) chitin synthase chs-1-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00520
Amino sugar and nucleotide sugar metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108886979
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108886979
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
108886979
Glycosyltransferases [BR:
lcf01003
]
Polysaccharide
Structural polysaccharide
108886979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
108886979
NCBI-ProteinID:
XP_050925201
UniProt:
A0AAJ8B2K5
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Position
LG3:20274217..20279995
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AA seq
736 aa
AA seq
DB search
MKRDLCKFHMKLNYLISSVISIFMNIDKGLFQEQQQIPDQKLVRTPYGGRVVITMPHGNS
LVIHFKDKQLIRHKKRWSQVMYLYYLLGWKVATKYYKRLEKAEDESELIREFEVRQQKTH
KEKHSTYLLALDGDTDFQPAAVMLLIDRLRMYPLVGAACGRIHPTGSGPMVWYQKFEYAV
GHWLQKTAEHVFGCVLCSPGCFSLFRAAALMDDNIMKKYTIKSSKARHYIQYDQGEDRWL
CTLLLKQGWRVEYNAASDAYTNAPEGFKEFYNQRRRWGPSTMANTVDLLGSSTLITHRNP
SMSKPYMLYQLFSMASSILAPSTVILMIAGSLTVLLDIHPNAALVMAVIPPAIFLGVSFK
IKSDTQIVIAAVMSILYAFLMMIAALVIIGNMVKDQTILTPSSIFLITLAVFYLITALLH
PQEVGLVIYGLLYILCIPSAYLLLAIYSMVNMNNVSWGTRETVPPAGAARPAATTQQTKT
EKAKSTFKKFFSRGNCCKKLCRRGSAEEVIFSRENLSVEAAEPERQPQNTIVEDERRPRE
EQRHEEPLFTCPDQCWVTQLQGLSDDMLLQEGTLDQDEEQFFRELTAKYLEPLPVNKEKQ
KEMTEELKDLRNKITFVYFICNALWLIMTFTLQLSNTSIFIKVPKVDYNLQFTGNYMYID
PLGFMFIVAFALLVLIQFLAMLYHRIYTLIHYVAFLDTESKSEKQKQKQQVEEVNTLVSS
TTDSAVNALNTQIFPE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgatctctgcaagtttcatatgaagctgaattatcttatatcctctgtcatt
agtatcttcatgaacatcgataaaggcctctttcaagagcagcagcagatcccagatcag
aagcttgtgaggacaccatatggagggcgtgtggtgatcaccatgcctcatggcaacagt
ctggtgattcacttcaaggacaagcaacttatccgccacaagaagagatggtctcaggta
atgtacttgtactacctcttgggctggaaagttgcgaccaagtattacaaacgtttggag
aaagcagaggatgagtctgaactgataagagagtttgaggtgcgacaacagaaaacacat
aaagagaaacacagcacctacctcctggctttagacggggacacagacttccagccggct
gctgtgatgctactcatcgatcgtctgaggatgtacccacttgttggggcagcatgtggc
aggattcaccccactggatcaggtcccatggtttggtaccagaagtttgaatatgctgtg
ggtcactggcttcaaaaaacagcagagcacgtgtttggctgtgtgctgtgcagccccggc
tgcttcagtctgtttagagcagcggcgctgatggacgacaacataatgaaaaaatacacc
atcaagtcctcaaaggctcgacactacattcagtacgaccaaggtgaggaccgctggctc
tgcactctgctgctgaagcagggatggagggtggagtacaatgcagcttctgatgcctac
accaacgcacctgaagggtttaaggagttttacaaccagcgccgccgatggggaccatcc
actatggcaaacactgtggacttgctgggctccagcacgctgattacccacaggaaccca
tccatgtccaaaccctacatgctgtaccagctcttcagcatggcttcatccatcctggca
ccctccactgtcatcctcatgatcgcaggaagtttgactgtgctgcttgacattcatccc
aatgctgctctggtcatggctgtgatacctcctgctatcttcctcggcgtcagcttcaag
atcaagtcagacactcagattgttattgcagcagtcatgagcatcctgtacgccttcctc
atgatgatagcagcacttgtcatcattggcaacatggtgaaagatcaaaccatcctgact
cccagcagcatcttcctcatcaccctcgctgtcttttacctcatcactgcactcttgcat
cctcaggaggtcggcctggtgatatacggcttactttacattctctgcatccccagcgcc
taccttctgctggctatttactccatggtcaacatgaacaatgtgtcctggggcaccagg
gagacagtgccccctgctggggctgccaggcctgcagccaccacccagcagactaaaact
gagaaagctaaaagcacattcaaaaagttcttctcacgaggcaactgctgcaaaaaactc
tgccggaggggcagtgcagaggaggtgattttcagccgggagaacctgagtgtggaggca
gcagagcctgaacgtcagccccaaaacacaattgtagaggatgaaaggaggcctcgggag
gaacagagacatgaggagcctcttttcacctgcccagaccagtgttgggtcacacagcta
cagggtttgtcagatgacatgctcctgcaagagggtacacttgaccaggatgaggagcag
ttcttcagagagctgacagcaaaatacctggagcctctgcctgtgaacaaagagaaacag
aaggaaatgactgaggaactcaaggatctgagaaacaagataacatttgtctacttcatc
tgcaacgccctctggctcataatgaccttcaccctccagctctcaaacacgtccatcttc
atcaaggtgccgaaggtcgactacaacctgcagttcacaggaaactacatgtacatcgac
ccgctgggcttcatgttcattgtggccttcgctctcctggttctcatccagttcttagcc
atgctgtaccacagaatctacactctgatccattatgtggccttcctggacacagagtcc
aagtctgaaaaacaaaagcaaaaacagcaagtcgaagaggtaaatactctagtcagctct
accactgactcagctgtaaatgctctgaacacccaaatatttcctgagtga
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