Lates calcarifer (barramundi perch): 108886989
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Entry
108886989 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108886989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108886989
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
108886989
Prokaryotic type
Archaeal type
TFE
108886989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
Zn_ribbon_15
DUF1272
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
108886989
NCBI-ProteinID:
XP_018537677
UniProt:
A0AAJ7V6F2
LinkDB
All DBs
Position
Unknown
AA seq
311 aa
AA seq
DB search
MIEPELLTEVPAALKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRVLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESVCPDARTLVARFNE
QIEPIYALLRETEDVNLSHDLLEPEPTEIPALKQSRERSAVSGETASGPHREAWSNKGSS
YADLYTQNVVISMEEQDDQQKQANEGKAPKERPVWLTQSTVPGCLQRALTSSRAVEMLCP
KPRMEELVLEL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaccagagctactgaccgaggtccctgcagcacttaagcggctagccaagcag
gtggtaaggggtttctatggagtggagcacgccttggccctggatgtgctgatccgcaat
ccctgtgtacgtgaggaggacatgctggagctgctgaagtttgaccgtaaacagctgcgc
tcagtactcaacaccttgaaggcagacaagtttgtcaaatgccgcatgagggtggagaca
gccccagatggcaagaccacgcggcacaactactacttcatcaattacagggtactggtc
aatgtggtcaagtataaattggaccacatgcgacggcgcattgagacagatgagcgagac
tccaccaaccgtgcttccttcaggtgcccttgctgcttctccaccttcacagacctagaa
gccaaccagctgtttgacccaatgacaggtacatttcgctgcaccttctgccagacggag
gtagaagaagacgagtctgtctgtcctgatgctaggacgctggtggcacgcttcaatgag
cagatcgaacccatctatgcactgctacgtgagactgaagatgtcaacttgtctcatgac
ctgctggaacctgagcctactgagatccctgcgctcaaacagagccgggaacgttctgca
gtatccggagaaacggcaagtggtccccaccgcgaagcctggtctaacaaaggctcatcc
tacgctgacctgtacacccagaatgtggttatcagcatggaggagcaggatgaccaacag
aaacaggccaatgagggcaaggcacctaaggagaggcccgtctggttgacccagagcacc
gtgccagggtgcttacagcgagccctgacatcctcaagagccgtggagatgttgtgcccg
aagcccaggatggaggagctggtcctggaattg
DBGET
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