Lates calcarifer (barramundi perch): 108887020
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Entry
108887020 CDS
T04895
Symbol
rab3il1
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108887020 (rab3il1)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108887020 (rab3il1)
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108887020 (rab3il1)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108887020 (rab3il1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
T3SSipB
fvmX5
SLFN-g3_helicase
DUF4407
XhlA
Motif
Other DBs
NCBI-GeneID:
108887020
NCBI-ProteinID:
XP_018537711
UniProt:
A0AAJ8BA88
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All DBs
Position
LG10:complement(10755955..10770435)
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AA seq
479 aa
AA seq
DB search
MDAFEGIHSVQISSSPPSSTSLGKGYEVLKAGRSGVAVYSSTVFFGTTDAASRHKSSRES
EEQGCVVGRLVDLDPEPESRVEGGGQAVPTSAREHGDLSRLRSSSLEIREKEIREKGSEI
LREQLDAAKRELKLKDKECERLSQVRNQLEQELEELTASLFEEAHKMVREANVKQAAAEK
QLKEAQGKIDVLQAEVTALKTLVLTSTPSSPNRQLHPQLQPSGTRGAYKHVGGHIRNKSA
SGAFPSSTGKPEPSSVSVQPAAKEDREPAVPALLSLILCLVPGQSVSVSYDSYWQEQGEG
LGTGSRQMDSVLYAEFLMWREHPSLDRSSAFLSRIYREDIGPCLSFTRSELSQLVQSAVE
NNSLTIEPVAMSALPMVKASAIECGGPNGFRAAIETKCALSGVSRLCRHRIKLGDKGSYY
YISPSSRARITAVCNFFTYIRYIQQGLVRHDAEQMFWEVMRLRREMTVAKLGFYLTDQG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttttgagggaattcacagcgtccagatttcctcctccccgccgtcttcaact
tcactgggcaagggatatgaagttctcaaggcggggagatctggagtagcagtgtactcc
tcaacagtcttctttgggacaactgatgcagcgtccagacacaaatccagcagggaatct
gaggagcagggctgcgttgttggacgattggtagatctggatccagagccagagtccaga
gtggagggaggagggcaggcggtgcccacctcagccagagagcatggcgacctctcccgg
ctccgcagctcctcactggaaatcagagaaaaagaaatccgagaaaagggctcagagatc
cttagggaacagctggacgctgcgaagagggaactgaaactgaaagacaaggagtgtgag
cgtctgtcgcaggtcaggaatcagctggagcaggagctggaggagctgacggccagtctg
tttgaggaagctcacaagatggtgcgtgaagcgaacgtcaaacaagcagcagcagaaaaa
cagctgaaggaggctcaggggaagattgacgttctgcaggcagaggtgacagcgctcaag
actctggtgttgacatccacgccctcttcaccaaaccgccagctgcacccacagctgcaa
ccttcgggaaccaggggggcgtacaaacacgttgggggacacatccgcaacaagagcgcg
agtggtgcatttccgtcctcgactggaaaaccagaaccttcgtcagtttctgttcagcct
gcggccaaagaagacagagagcctgctgttcctgctctcctctctctgattctctgcctg
gttcctggacagtctgtcagtgtgagctatgactcttactggcaggagcagggagagggt
cttggcactggcagcaggcagatggactcggttctgtatgcagagtttctgatgtggagg
gaacatccgagtctagaccgctcctccgccttcctgagtcgtatctacagagaagacatc
ggaccctgtctctccttcacaagatctgagctgtcccagctggtacagagcgcagtggaa
aacaactctctgacgatcgagcctgtggccatgtcagcgttaccgatggttaaagcctca
gctatagagtgtggaggccctaatggctttagggcagcaatagagacaaaatgtgcgtta
agcggcgtgtcgcgactctgtcgacatcgcattaaacttggcgacaaggggagctactac
tacatctctccttccagccgagcacggatcacagcagtttgcaatttttttacttatatc
cgctacatccagcagggcctggtgagacatgacgcggagcagatgttctgggaggtgatg
cgactccgaagagagatgactgtggccaagttaggtttctacctcactgaccagggctag
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