Lates calcarifer (barramundi perch): 108887090
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Entry
108887090 CDS
T04895
Name
(RefSeq) TRAF3-interacting protein 1 isoform X1
KO
K19680
TRAF3-interacting protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108887090
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
108887090
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GFIT
Motif
Pfam:
MIP-T3_C
MIP-T3
CorA
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
108887090
NCBI-ProteinID:
XP_018537783
UniProt:
A0AAJ7PSX6
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Position
LG1:complement(10005228..10023436)
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AA seq
643 aa
AA seq
DB search
MNAAVVKKTQDTLGKVIKKPPLTEKLLSKPPFRYLHDIFSEVIRTTGFMKGLYGENEMKS
DNVKDKDSKIAFLQKAIDVVMLVSGEPLAAKPARIVAGHEPEKTNELLQVIAKCCLNKMP
SDDAVKRVLAGEKVDMKTKASTSRSQDKENRGRERHLDREEKKKITERSGSRDQKDPDQP
KEQESRHRDGEKEHHRDRERSDKHHRSEQDRGKDRDKDKSRDRERDKDRDKGRVKDRDKE
KDRERDREREKDKEKDKDREKTRERDSHRDRERDKDKRRDRDKEREKERERHKEGEERNK
TVENGNSKARVSEEPQQTSSPDEPSKTAKPVPAPAEAVENQTDSPARIPRPSSAKGQRRR
PKIGGQDESDSEGDGDAQSAQKPVPQENGDAAGSSGPSDVASSNRRFARPSSARPAPPRV
KRQESYTDVNSERLSSAKPSAPVIMDGKKLSEDEEDEDEQFLVEEAVPPPPDAPEMEVDP
AQGLDSEEKHGGLVKKILETKKDYELSPSSPKSKEQNSVSEAARKKERDMVRREIERLRS
SIQTVCRSSLPLGKIMDYIQEDMDAMQAELHTWRRENKEHAQALLQEQRATDRAVEPLKA
ELAELEQLIKDQQDKICAVRSNILKNEEKIQKMVTGINFSSRT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggcagtggtcaaaaagacccaggacacgctgggcaaagtgataaagaaaccg
cctctcacggagaaactgcttagcaagcccccgtttcgatacctccacgacatcttcagt
gaggtcatcaggaccactgggtttatgaaagggctatatggagagaatgaaatgaagtca
gataatgttaaggataaggattctaagatagccttcctccagaaagccatagatgtcgtg
atgctggtgagtggtgagcccctggcagcaaagccagcacgcattgtggctggccatgag
cctgagaaaaccaatgagctcctgcaggtcatcgccaagtgctgcctcaacaagatgccc
agtgatgatgcagtgaagcgagtacttgcaggagaaaaggtggacatgaagaccaaggcc
agcacctccaggtcccaggacaaggagaatagaggacgtgagcgtcacctggatagagag
gagaagaagaaaattacagagcgcagcgggagccgggaccagaaggacccagaccagccc
aaagagcaggagagtcgccatagagatggggagaaagagcaccaccgggacagggaacgc
tctgacaagcaccaccgcagtgaacaggaccgtggcaaagaccgcgacaaagacaagagc
cgagaccgggagcgagacaaggatagagataaaggacgagttaaagacagggacaaggag
aaggacagagagagagatagagaaagggaaaaagacaaagagaaggataaagaccgggaa
aagacaagagagagagattcgcacagagaccgggaaagagacaaggacaaacgaagagac
agagacaaagagcgggagaaggagagagagcgacacaaagagggggaagagaggaacaaa
actgtagagaatggcaatagcaaggccagagtatcagaggaaccacagcaaacctccagc
cctgacgagcccagcaaaacagccaaacctgtgccagctcctgcagaagcagttgaaaac
cagactgacagtccagctagaatacctcggccttcatctgccaaagggcagaggcggaga
cctaaaattggaggtcaagatgaatctgacagtgagggagatggagatgctcagtcagcc
cagaaacctgtccctcaggaaaatggagacgctgcaggctcctcaggtccatctgacgtg
gcttccagcaacagacgatttgcccgacccagcagtgctcgcccagcgcctcctcgagtc
aagaggcaggagagttacactgatgtgaactcagagagactgtcaagtgccaagccctca
gcacctgtcatcatggatgggaagaagctgtctgaggatgaggaggatgaagatgagcag
ttccttgtggaggaggctgtccctccacccccagatgctcctgagatggaggtggatcct
gcacagggacttgacagtgaagagaaacacggtggccttgtgaaaaagatccttgagacc
aagaaagactatgaactgtcgccatcctcccccaaatctaaagagcagaactcggtgtct
gaagcggcgcggaagaaagagcgggacatggtcaggagggagattgagcggctgcgttcg
tccatccagacggtgtgccgcagctccctgcctctgggcaagatcatggactacatccag
gaggacatggacgccatgcaggctgaactgcacacctggcggcgggagaacaaggagcac
gcacaggccttgctgcaggagcagagagcgacagaccgggcagtggagcctcttaaagca
gaactagctgagctggagcagctgatcaaggaccagcaggacaagatttgtgctgtaagg
tccaacatactgaagaacgaagagaagatccagaagatggtgacaggaatcaacttctcc
tcaagaacctga
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