Lates calcarifer (barramundi perch): 108887092
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Entry
108887092 CDS
T04895
Symbol
adarb1b
Name
(RefSeq) double-stranded RNA-specific editase 1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108887092 (adarb1b)
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108887092 (adarb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
108887092
NCBI-ProteinID:
XP_018537787
UniProt:
A0AAJ7PSZ7
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All DBs
Position
LG1:complement(10035122..10125494)
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AA seq
698 aa
AA seq
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MDVDEEENMSSSSTDVKENRNLDNVSCKDGLGVAEQLPNGSGLGSRKRPLEEGNNGHTHS
KFRAKKRKKTPGPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQMFEGM
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
AAPEESFYLGSNGSSSLNSLGEYPLPTPPGSNLVQAPLPPPSAFSSPSSGKNPVMILNEL
RPGLKYDFVSESGESHAKNFVMSVTVDAQTFEGSGRNKKLAKARAAQAALSALFNMQLDQ
TPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDV
KEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYTQLEFFLSNSKEDHQ
KSIFVHCDKGGYRLKDNVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRT
KIESGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYF
SSIILGSLYHADHLSRAMYQRIADIEDLPQQFTLNRPLLSGISNAEARQPGKAPNFSVNW
TVGDQALEVINATTGKDDMGRASRLCKHALYSRWVRLHSKLSSILRIKVLKPSSYHEAKQ
AATEYHSAKQALIKAFHKAGLGAWVKKPIEQDQFTLSS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgaggaggagaatatgagttcgagcagcaccgacgttaaggaaaaccga
aacctggacaacgtgtcctgcaaagacgggctgggagtggctgaacagctccccaatgga
agcggcctgggcagtcgaaagcgccccctagaggagggaaacaatggtcacacacactcc
aagtttcgggccaagaagcgcaagaaaacgccggggccggtcctgcccaagaacgctctg
atgcagctgaacgaaatcaaaccgggtctacagtacaaactgctgtctcagacaggaccg
gtccacgcaccagtgtttgtcatgaccgtggaggtcaatggacagatgtttgagggcatg
ggcccaacgaagaagaaggctaagctgaacgcagccgagaaagcgctgcgttccttcgtc
cagttccccaatgcctctgaggcacacctggccatgggtcgaacactgacagtgaacaca
gactttacatctgaccaagctgacttccctgacatgctcttcaacggctttgagacgcca
gccgcacctgaagagtccttctatttaggctccaatggtagcagctccttaaactctcta
ggggagtacccactgcccacaccacctggcagcaaccttgtccaggccccattgccccct
ccatcggcgttcagctcgccctccagtggcaaaaacccagtcatgatcctcaatgagctc
aggccaggtctcaaatatgactttgtctcagagagcggggagagtcacgccaagaatttt
gtgatgtcagtaacagtggatgcacagacgtttgaaggctcagggcgcaacaagaaactg
gctaaagcccgggcagcgcaagccgccctctcagctctcttcaacatgcagctagaccag
acaccatcccggcaacccataccaagagagggattacagctccatctaccccaggttctg
gctgatgccgtctctcgcctggtggtggataagttcagtgagctgacagacaacttcacc
tccccccatgcacgacggaaagtcctagcaggagtcgtcatgacaacagggacagacgtg
aaggaagcacaggtcatttgtgtctccacaggaaccaaatgcatcaacggtgagtacatg
agtgaccgcggcctggcactcaatgactgccacgctgagataatcgcccgacgctcgctc
atcaggtacctctacactcagctggagttcttcctcagcaacagcaaggaggaccaccag
aagtcgatattcgtgcactgtgacaagggaggctacaggttaaaggacaacgtccagttc
cacctctacatcagcacctcgccctgcggagacgcccggatcttctccccgcacgaggcc
ggagtggaagaccaaggagaccggcatcctaaccggaaagcacggggccagctaaggacc
aaaattgagtctggggaaggcaccatccctgtgaggtccagcaacaccatccagacctgg
gacggggtgctgcaaggagagaggctactcacaatgtcatgcagtgacaagatcgcaagg
tggaatgtggtgggcatccagggctctttgatgagctacttcacagagccaatctacttc
tccagcatcatcctcggcagcctttaccacgccgaccacctctcccgggccatgtaccag
cgcatcgcagatatcgaggacctgccccagcagttcactctcaacaggcctttactcagt
ggtataagtaatgcagaggccaggcaaccaggcaaggcaccaaacttcagtgtgaactgg
acagtgggcgaccaggccctagaggtgatcaacgcaaccacgggcaaggacgacatgggt
cgcgcttcacgtctttgcaagcacgccctctacagccgctgggtgcgcctacactccaag
ctgtcatccatcttgcggatcaaggtgctcaagcccagctcctaccatgaagccaagcag
gcagccacagagtaccactctgctaagcaggcgctcatcaaggccttccacaaggccggc
ctgggggcctgggtcaaaaagcccattgagcaagaccagttcaccctcagctcctga
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