Lates calcarifer (barramundi perch): 108887184
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Entry
108887184 CDS
T04895
Name
(RefSeq) B-cell receptor CD22 isoform X1
KO
K06467
CD22 antigen
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108887184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108887184
04090 CD molecules [BR:
lcf04090
]
108887184
04091 Lectins [BR:
lcf04091
]
108887184
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
SIGLEC family
108887184
CD molecules [BR:
lcf04090
]
Proteins
108887184
Lectins [BR:
lcf04091
]
I-type lectins (Siglecs)
108887184
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
V-set
I-set
ig
Ig_CD22
Ig_4
Motif
Other DBs
NCBI-GeneID:
108887184
NCBI-ProteinID:
XP_050926378
UniProt:
A0AAJ8B6X8
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All DBs
Position
LG5:4628359..4654333
Genome browser
AA seq
578 aa
AA seq
DB search
MKGCLPFNPKNTAGLETKTAMLLAEAVCLFLAFILHISGVHGRSNRICALKGSSVDLPCS
AEGPVSSMKWYTLHWNDSYILSNFSGDGSRYNISEGSDFNLIIKDLRESDKNIYCCSHIT
DSPGHCWFYRTELHVTDLQVKVIPTTGEQTVSLMCSTSCPLTENPAAYIWYKNREFLYQD
WSPWYQQLVSSEEAVTYSCAIKGYEHLRAPEVSVDSVTSTCFTVTYADGTMCSKNQKSVD
EPCSITYPTELYVERTPVDKEYVRLTCAPSCPLTDPKTAYRWYWNESPYKYSESQNFTVP
REYRFNSYSCAIKGHEDLHTAQVCSSKDDSCFSVNYVRRRICALQGSSVTIISEYSYPDS
PPSLAKFWYKIKRSGGEAAEKVTSDSGWVEYCDNLKNRYTLTINGLQKDDTAEYIFRLML
PREEFDFPGVTLVVSDLKVRMSPSAEVTEGQRVTLTCSTSCPLTDDKNYIWFLNSRPLTL
PENQNKHLVLDPVSSQHAGNYSCAVKIQRDIRSPEEILTVQVFGKSIAAINAVRLAVVLL
IPVPLLLFHLWLSRWTHSIRTSHSAAQREPEEQQKDSM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggatgcttgccttttaaccctaaaaacactgctggtttagagactaaaacagcc
atgttgttggcagaggctgtgtgtttgtttttggccttcatcctgcacatctcaggcgtt
catggacgtagcaacaggatctgtgctttaaaaggctcatcagtggatctgccctgctca
gctgaaggtcctgtttcgagtatgaaatggtacactctacactggaatgactcctacatt
ctgagcaacttctctggagatggaagtcgttacaacatatctgaagggagtgatttcaac
ctaatcatcaaagatctgcgagagagtgataaaaatatttactgctgcagccacataact
gactctccaggacactgctggttctatagaactgagctgcatgttacagacctgcaggta
aaggtgattcccaccacaggggaacagacagtatcactgatgtgtagcaccagctgtcct
ctgactgaaaaccctgcagcctacatctggtacaagaacagagagtttctctatcaggac
tggtctccctggtaccaacagctggtcagcagtgaggaagcagtcacatactcctgtgct
atcaaaggctacgagcatctcagagcccctgaagtctcagtggattctgtcacatccacc
tgctttactgtgacctatgccgacgggacaatgtgttctaaaaaccagaaatcagtggat
gagccctgctccatcacatatcccacagaattatatgttgaaaggacgcctgtagataag
gaatatgtcagactgacctgtgcccccagctgccctctgactgaccctaaaactgcctat
aggtggtactggaatgagagtccatacaaatactctgagagtcaaaactttacagttccc
agagagtatagattcaatagctactcctgtgctataaaaggccacgaggatctgcacact
gctcaagtctgtagttctaaggatgactcctgctttagtgtgaattatgtcagaaggaga
atctgtgctctgcaaggctcttcagtgaccatcataagtgaatactcctatcctgactcc
ccaccatccctggctaaattttggtataaaataaagagaagtggtggggaggctgctgaa
aaggtaacaagcgattctggttgggtggagtattgtgacaacctgaagaaccgctacacc
ctgacaataaatgggcttcagaaggatgacacagcagaatacatattcagactcatgttg
cctcgggaagagtttgattttcctggagtgactttggttgtctcagacctgaaggtgagg
atgagtccctctgcagaggtgacagagggtcagagagtcacactgacctgcagtaccagc
tgtcctctgactgacgacaaaaactacatttggtttttgaacagtcgacctctgaccctg
ccagagaaccaaaacaaacacctggttctggacccagtcagcagtcagcatgcaggaaac
tactcctgtgctgttaaaatccagagagacatcagatcccctgaggagattctcactgtt
caagtttttgggaagtcgatagcagcgattaatgcagtgagactggccgttgtattgctg
atcccagttcctctccttctcttccacctgtggctgagcagatggactcacagtataaga
acatctcactctgcagcacagagagagccagaagagcagcagaaagacagtatgtaa
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