Lates calcarifer (barramundi perch): 108887189
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Entry
108887189 CDS
T04895
Name
(RefSeq) beta-1,3-galactosyltransferase 2 isoform X1
KO
K07820
beta-1,3-galactosyltransferase 2 [EC:
2.4.1.86
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00601
Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100
Metabolic pathways
Module
lcf_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
108887189
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108887189
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.86 N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase
108887189
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Type 1 chain
108887189
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Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
108887189
NCBI-ProteinID:
XP_018537985
UniProt:
A0AAJ7V6M2
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Position
LG5:complement(4607681..4616347)
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AA seq
440 aa
AA seq
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MASTESIVRVRVLCRRPFLLTAGGFRRVLKAEVGLLLSMLFASPLKSRRFLRLFSAQITA
SHQQLVESSHHQKKPLFHIWFKFLLLLCLVLFGLGYTLSSSSVSMWQTFPLYEHYYRIFN
WTSKVNAPPSYYVHPKHRVKQNEIHENMQPLSILPTVAPSGTQYHQGYPRNYHFIMDNPE
VCKTNTPFLVLMVPVAPNNREARDAIRQTWGKDTVVQGEVVLTLFMLGLPGGADAGQQKE
KLNQENLEHHDLIQSDFMDTYLNLTIKTMVIMDWLATRCPTAAYAMKIDSDMFLNIDNLV
TMLQKPGIPKLNYLTGMLMWNRPVVRTKSSKWYVSEELYPDPTYPTYTLGMGYVFSNDLP
EKFVQVSKSIKPFNIEDAYIGMCMKKLGLAPTSPPNPSQFKAYNTKYNRCEYSKVITYIL
GSSQELIKYWTDLKKPEPPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggagtccattgtccgtgtcagggttctctgtcgtcggccgttcctgctg
actgccggcggcttcagacgcgtcctcaaggcggaggtcggcctccttctgtccatgctg
ttcgcctccccgctgaaatcacggcgattcttgaggttgttctccgctcagatcaccgct
tcacatcaacaacttgtcgagagttcacatcatcagaagaagcctttgtttcatatttgg
ttcaagttcctgctcctgctttgtctcgtactctttggcttgggttatactctgtcaagc
agctctgtgtcaatgtggcagacgtttccactctatgagcactactacaggattttcaat
tggaccagtaaagttaacgctcctccttcttattacgttcatccaaaacacagggttaaa
caaaatgaaatccatgaaaacatgcaaccactttctatactacctactgtagcaccttca
ggtactcagtaccaccaaggctacccacgcaactaccactttattatggataacccagag
gtgtgtaaaaccaacacccctttcctggtcctgatggttccagtcgcaccaaataacagg
gaagctcgggacgccatcaggcagacatggggcaaagacactgtggttcagggcgaggtg
gtgctcactctgttcatgctgggcctccctggaggagctgatgctgggcagcaaaaggag
aagctcaaccaggagaatcttgagcaccacgatctgatccagagtgacttcatggacact
tacctcaatctgaccatcaaaaccatggtgatcatggactggctggcaacccgctgccct
acagcagcatacgccatgaagattgattctgacatgttcttgaacattgacaatctggtc
actatgctgcagaagccaggcattcctaagctgaactacctgacagggatgcttatgtgg
aacaggccggttgtccgtacaaagagctctaagtggtatgtctctgaggagttgtaccca
gatcccacgtacccgacctacactctcggcatgggatatgtcttctccaatgatctccca
gagaaatttgtgcaggtctcaaaatcaatcaaaccctttaatatagaggatgcttatatt
ggaatgtgcatgaaaaagttgggacttgcaccaacatcaccgccaaatccctcccagttc
aaggcttataacaccaaatacaatcgctgtgaatactccaaggtcatcacctacattctt
ggttcttcacaagagttgataaaatactggacagacttgaagaagcctgaaccaccttgt
tag
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