Lates calcarifer (barramundi perch): 108887196
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Entry
108887196 CDS
T04895
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 3 isoform X1
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108887196
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108887196
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108887196
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108887196
Intermediate filaments
Intermediate filament-binding proteins
108887196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
DUF948
CH_2
Motif
Other DBs
NCBI-GeneID:
108887196
NCBI-ProteinID:
XP_018537996
UniProt:
A0AAJ7PT53
LinkDB
All DBs
Position
LG5:4743735..4759121
Genome browser
AA seq
1592 aa
AA seq
DB search
MVDSPSAMKKTFSVPEIKPLDQYDFNRAKICASVRWLLSKSYGSAENVPVELREPLYKDQ
YEQEHLKPAVSKLLLSPEIYCRAQALLAQAHGVSLPASQGSPADNSALLQFLIKRGFTPK
VQDVDVTEEDLSNVPIKTKSHLALIDALMSLAAKETVGRVKMAVEAEQIGVGSPWENALL
FWVNRLNQRLRESTEEEEPPKSQTCTDLQPAQETCQSTRWYWKLVPHAIAFCLKESGNKP
PVIRYRKDKVQSKLTPTFPLVSAVKDLSNGCAIAAVLHYYCPSLLPLEDVCLKDTMSVAD
SLYNLQLIKEFCESSLQSCCPLAVEDLLYAPPLLHLNIMSFIAELLEWFEVKKPDFVQPI
QPVDLTDVSGLLDCTSPVSGNSNSGSPSFIFKQPFVPISSPVSPENKSWTKKQISRPLSA
VTFSIPFGLDSDVDIVMGNPIDSVFRSVSTDSLTTGIPAMTSPATSAGMTRVPYSPPEDL
SHLVSASAPSQRSSWGPYAHTAPLGELPTIEEALQVVHTPNSKDRKKGRTPEKGSRGVLG
GRPEPRLRPEGAPAGFFLHSPEEDNPQLSSSAPCRSGVLYRPVGGEVGNNERQGRGERRE
RSGRSSDMSRDDDSVLRDGSVDSSEASDDTPRNAPGNIRPSNGRQGNHSTSNSPRMTSFA
ERRDSRRRHPAAPGEESASAPTPTTPGTPHTPSTPAGAPGHQDSPGARGPEPGSEAWELG
VRLEEKRKSIEAQKRRIEAIFAKHRQRLGKTAFLQLKREQGEGGGEGAEEDNLTLEERLT
RMEEQLKQEEEKEEKEKEKDGDKDKEKPSVSNPPRLEKQVTFSIESKKGTEKEKAGETVI
VEYNEVVQKLSEALQSLQKDMQKLTEQQQQLMNNQRPRNTPKTTPKSTPRSNIKTPPKTP
PHTPTKTPPRTPIKTPTRNNNSKVWMIPANPSPSASSPSRRSHGISLSTSPKTVISSSCP
APRTKIHSTSMSRSPKHHPRSQNQRPHPRPSELKFPPLNRVLTPTQTVDTLPHLRRVSPS
KCQVQTSSSFRIGGPKTPQESPQAAQQPQPDESTSDTGSSETPTQFSLELEQEDTEAVGG
LPVLSQPKQDCPRAAGGSSSGAPSECSFESETLSVSAAFSAGGEEGRGARKRCSLIEVSQ
SSLGGPEGGSDEPTDEGQEFSSDSMSDHTESAAEPARRIATEVFDPLEQLNRALEATDLP
EQETESKEHTTQAETLEPSGEPNEVETRGGIGFFFKEEVHSEGEMAQRRALLLERQQKRT
EELKRRRQWHEQERENRPATSDRTVASPSNTPPAGTTSPSPTPPATPARRGDFTRGEYAR
RQQLRLMDDLDKVLRQKTSGQGRSSAKKTRSRPRSMTREETQLSLSPAKGATCSKLTKVY
SHSSLNLAATDDPGHRGSDPTKKPHSRPDSPSGCVIPSRLANQNGDKDWESGSNGTSPAP
EYTGPKLFKEPSFKSNKFIIHNALSRCCLAGKVNETQKNKIVEEMEKSPANHFLILFRDS
SCQFRGVYTMNPDSQELVRLAGVGPRTISSTQVESIYKYSSDRKQFSAIPSKTMGMSVDA
FTIPSHLWQGGGGAGGGGSRRASITKKAVISK
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggtggactctcccagcgcgatgaaaaagaccttctcggtgccggagataaaaccgttg
gaccagtacgacttcaatcgggccaagatctgcgccagcgtccggtggctgctgtcgaaa
tcgtacggctctgcagaaaatgttcctgtcgagttgcgggagccgctttacaaggaccag
tatgaacaagagcacctcaagccggccgtctccaagctgcttctctccccggagatctac
tgccgagctcaggccctgctggcccaggcacatggggtctctttgccagcgtcacagggg
tccccggccgacaactccgccctgctgcagttcctcatcaagagaggtttcaccccgaag
gtccaggatgtagatgtcaccgaggaggatctcagcaacgtccccatcaagacaaaatcc
caccttgccctgattgacgctctgatgtcactggctgctaaagagacggtgggccgggtg
aagatggcggtggaggcggagcagattggcgttgggtctccatgggagaacgctctgctc
ttctgggtcaacaggttgaaccagaggttgagagaaagcacagaggaagaggagccccca
aagtcgcagacgtgtacagacctgcagcccgctcaggaaacgtgtcaatccacccgttgg
tactggaaactagtcccccatgctatcgctttttgtttgaaggagtcggggaataagccg
ccagtgattcgctataggaaggacaaagtgcagtctaagctgactcctactttccccctg
gtttctgcggtcaaagatctctctaatggctgtgctatagctgctgtgctgcattactac
tgccccagcttgctgcctcttgaggatgtgtgtctaaaggacactatgtcagtggctgac
agtctctacaacctgcagctgatcaaagagttttgtgagagtagtttacagagctgctgc
cccctcgctgtggaggacctgctctacgctccaccacttcttcatctgaacatcatgagc
ttcatagcagagctgctggagtggtttgaagtcaagaagcctgactttgtccagcccata
caacccgtcgacctcacagatgtctcagggttactggactgtacaagtcctgtcagtggg
aacagcaacagtggttcgccttcctttatcttcaaacaaccatttgtgcccatctcctcc
ccagtgtcaccagaaaacaaaagttggacaaagaagcaaatcagtcgtcctctgtcagca
gtgactttcagcatcccatttgggctggacagtgatgttgacattgtcatgggaaaccca
atagattctgtctttcgctctgtcagcactgacagcctaaccaccggcatccctgcaatg
acctcaccggcgacctcagcagggatgactcgtgtcccgtacagccctccagaggacctc
agccacctggtcagcgcttcagccccatcgcagcggtcttcctggggtccttacgctcac
acagcaccactaggagagctgccaactatcgaggaggcgctacaggtggttcatactccc
aacagcaaagatcgtaagaagggaaggacgccagagaaaggtagcagaggagttttggga
ggaaggccggaacccaggttgcgtccagagggagcccccgctggtttcttcctgcactcc
cccgaggaggataatccccagctcagtagctctgctccctgtcgctctggagtcctctac
cggcctgttggaggagaagtgggcaataacgaaaggcaaggccggggagagaggagggaa
agatcaggacgtagctctgatatgtcacgcgacgatgactctgttctacgagatggcagc
gttgactcctctgaagcatcagatgatacccctagaaacgcccctggtaacattcgaccc
agtaacggtcgccagggaaaccacagcaccagcaatagtccacgcatgacaagctttgct
gagcgacgagacagcagaagaagacatcccgctgctcctggagaggagtcagcctctgct
ccgaccccaacaacaccaggaactccacatacgccctcaaccccagcaggagcacctggc
caccaggacagtccaggtgccagaggcccggaaccgggttcagaggcctgggagttgggg
gttcgcctggaggaaaaacgcaaaagcattgaagcccagaaaagacgcattgaagccatc
tttgccaaacacagacagaggcttggaaaaactgctttccttcagttgaaaagagagcag
ggagaaggcggaggggagggagcagaggaggataatctcaccctggaggagcgcctcacc
cgcatggaggagcaactgaaacaggaggaggagaaggaagagaaagagaaagaaaaagac
ggagataaggacaaagagaagccatctgtttccaatcctcctcgtttggagaagcaggtc
acgttctctattgaaagtaagaaagggacagagaaagagaaagcaggggaaactgtcatt
gtggaatataatgaagtggtacagaaactgagtgaagctctgcagtcactacaaaaggac
atgcagaaacttacagaacagcaacagcagctcatgaacaaccaaagacccagaaataca
cccaaaaccactccaaaatcaacacctagaagtaacatcaaaacaccacccaaaacccct
ccccacacaccaacaaagacaccaccaagaaccccgataaagactcccaccaggaacaac
aacagtaaagtttggatgatccctgccaatcccagtccctctgcctcctctccgtcacgg
cgttctcacggtatttctttgtccacctcaccaaaaactgtcatctcttcctcctgccct
gctcctcgcactaagatccactccacctccatgtctcgcagccccaaacaccacccacgc
tctcaaaatcagcgcccccacccacggccctcggaactcaagttccctccactcaatcgt
gtcttgacaccaacccagactgtggacacgctcccccacttgcgccgtgtgtcccccagc
aagtgtcaggttcagacctcctcttccttccgcattggtggtcccaagactcctcaggaa
tctcctcaggctgcccagcagccacagcctgatgagagcacctcagacacaggctctagc
gagacacccacccagttcagcctggagctggagcaggaggacacagaggctgtcggaggg
ctgccggtcttgtcacagcccaaacaagattgtcccagggctgctggtggcagcagctct
ggtgctccttcagagtgctcgtttgagagcgagactttgtctgtttctgctgcgttcagc
gcaggaggtgaagaagggagaggtgcaaggaagcgctgcagcctcattgaggtgtcacaa
tcatcccttggagggccagaaggaggcagtgatgaaccaactgatgaagggcaggagttt
tcctctgattctatgagtgatcacacggaatctgctgcagaacctgcaagaagaatcgcc
acagaagtcttcgatcctctagagcagctgaatcgagctttagaagccacggatttgcca
gaacaagagactgaatccaaagaacacacaacacaagcagaaactttggaaccgagtgga
gagccgaatgaggtggaaaccagaggaggaataggattcttcttcaaggaagaggttcat
agtgaaggggagatggcccagcgcagagctctcctattggaaagacagcagaagagaacg
gaggagctgaagaggagacgacagtggcatgagcaagaaagggaaaacagaccagcaacc
tcagacaggacagtagcatctccctccaatacacctcctgccggtaccacctccccttcc
cccacacctcctgctaccccagcccgtcgtggagatttcacacgaggggagtacgcacgg
cggcagcagctcaggctcatggatgacttggacaaggtgctgcggcagaaaacatccggg
caaggacgatcttcggctaagaaaactcgctctcggcctcgcagtatgaccagggaggaa
actcagctgtctctgagtccagccaaaggagcaacttgctctaagttgaccaaagtctac
tctcactcctccctcaatctggccgccacggatgatccaggacaccgtggtagtgacccc
actaagaaaccccacagccgtcctgattcaccctcaggatgtgtgataccaagtagactg
gctaatcagaacggagataaggactgggagagcggctccaatggaacctcacctgcccca
gaatacacaggtccaaagctcttcaaagaaccaagcttcaagtccaacaaatttatcatt
cacaacgctctctctcgctgctgcctggctggaaaggtcaacgagacacaaaaaaacaag
atagttgaggagatggagaagagtcctgccaaccacttcctcatcctcttccgtgattcc
agctgccagttcaggggcgtttacaccatgaaccccgactcccaggagctggtacgattg
gctggcgtgggcccccggacaattagctccacccaggtggagtccatttacaaatacagt
tcagacaggaagcagttcagtgccatcccctctaaaaccatgggcatgagcgtggatgcc
ttcactatccctagccatctttggcaagggggagggggggcaggaggaggaggaagcagg
agagcaagcattaccaagaaggcggttatttccaagtga
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