KEGG   Lates calcarifer (barramundi perch): 108887216
Entry
108887216         CDS       T04895                                 
Name
(RefSeq) probable glutamate--tRNA ligase, mitochondrial
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00860  Porphyrin metabolism
lcf00970  Aminoacyl-tRNA biosynthesis
lcf01100  Metabolic pathways
lcf01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    108887216
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108887216
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lcf01007]
    108887216
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lcf03016]
    108887216
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lcf02048]
    108887216
Enzymes [BR:lcf01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     108887216
Amino acid related enzymes [BR:lcf01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   108887216
Transfer RNA biogenesis [BR:lcf03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    108887216
 Prokaryotic type
   Other AARSs
    108887216
Prokaryotic defense system [BR:lcf02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    108887216
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 108887216
NCBI-ProteinID: XP_018538024
UniProt: A0A4W6G9D3
LinkDB
Position
LG5:5051747..5057750
AA seq 545 aa
MSLWLRSCQRRYLNTVVTRRGLQCPTRTRRGKLQSDAVVRRRCSTVQGEVRVRFAPSPTG
FLHLGGLRTALYNYIFAKKYGGAFILRLEDTDQSRLVPGAAESIEDMLEWAGIPPDESPR
QGGPAGPYLQSQRLDLYSQTAQQLLESGQAYYCFCSPQRLELLKKAALRSGETPRYDNRC
RHLRVDQVQEKLAQGTAHVIRFRLEEGVEPFQDLIFGWNRHEVAQVEGDPVVIKADGFPT
YHLANIVDDHYMKISHVLRGSEWLISTSKHLLMYRALGWTPPTFGHLPLLMNKDGSKLSK
RQGDIFIQSFQRDGILPEALLDITTNCGSGFSTNRMGRRIDELISEFNPSKITTHSALLD
LERLPEFNRIHLQQRIEDDERCLLLIKDLQVQIQQAYTTEIQDEEVLHEDYIRRVLHLRK
GHISSLKELVSPGYSYLWVRPSFSSQQVTAFTAEAHHIASLVLKLMEERGEELTVDQLSE
DLKTLAKQAKATKYRDVMKLLRLVLSGLQQGPSVAEMMVSLGRAEISHRFQKLLLLSETG
HPVTS
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgtcgttgtggctgaggtcatgtcagcggcgttaccttaacaccgtggtgacccggaga
ggtctccagtgtcccaccagaaccaggcggggtaaactccagtcggacgccgtcgttaga
agacgctgctccacggtccagggggaggtgagggtccggtttgcacctagtccgacaggc
ttcttgcacctcggaggcctccgaactgctctctacaactacatctttgcaaagaagtat
ggaggggcattcatcctgcgactggaggacactgaccagagcagactggtaccaggagca
gcagagtccatagaggacatgctggagtgggctggtatacctccagatgagagtcctcgt
caaggtgggccggcgggtccatatctgcagtcgcagagattagatctgtacagtcagaca
gcccagcagcttcttgagagtggtcaagcctattactgtttctgcagcccgcagagactg
gagctactcaaaaaagcagctttgaggagcggagagactccaaggtatgacaacaggtgt
cgtcatcttcgggtagaccaggtccaggagaaactggctcagggaacagcacatgtgatc
aggtttcgtctggaagaaggtgtcgagccttttcaggatctgatctttggatggaatcgt
catgaggtggcccaggtggagggggaccctgtggtgatcaaagcagatggctttcccacc
tatcacctcgccaacatagtagacgatcattacatgaagattagccatgttctgcggggg
tccgagtggctcatctccacctccaaacatctcctcatgtaccgagctctcggatggacg
ccacccacctttggacatctgccgctgctgatgaacaaagacggcagcaaactgtctaag
aggcagggggatatattcatccagagcttccagagagacgggatcctgcccgaggctctg
ctggatatcaccaccaactgcggatctggattcagcaccaatcgaatggggaggaggata
gatgagctgatctctgagtttaatccctcaaagatcacaacgcactctgctttgttagac
ctggaaagactgccagagttcaacagaatccacctgcagcagcgtattgaagatgacgag
cggtgccttctgctgataaaagatctgcaggtacagatccagcaggcctacacaacagag
atccaggatgaagaggtcctgcatgaggattacatcaggcgggtgctgcatcttcgtaag
ggtcacatatcctccctgaaagagcttgtaagtcctggttattcttacttgtgggttcgt
ccttccttctccagccagcaggtgacagcattcactgcagaagcccatcacatcgcctca
ctagtactgaaactgatggaggagcgaggtgaggagctgacagtggatcaactcagtgaa
gatctgaagactttagctaaacaggctaaagccacaaagtacagagatgtgatgaagctg
ctacgtctggttctcagcggtctgcagcaaggtcccagtgtagccgagatgatggtgtct
ctggggcgtgcagagatcagccatcgattccagaagctgctgctgctttcagagactgga
catcctgtcacctcctga

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