Lates calcarifer (barramundi perch): 108887225
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Entry
108887225 CDS
T04895
Symbol
esr2a
Name
(RefSeq) estrogen receptor 2a isoform X1
KO
K08551
estrogen receptor beta
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108887225 (esr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108887225 (esr2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lcf03310
]
108887225 (esr2a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
108887225 (esr2a)
Nuclear receptors [BR:
lcf03310
]
3. Estrogen like
3A. Estrogen receptor
108887225 (esr2a)
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GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108887225
NCBI-ProteinID:
XP_018538032
UniProt:
A0AAJ7PT55
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Position
LG7_1:complement(5550071..5566001)
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AA seq
565 aa
AA seq
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MATASPEKDQPLLQLQEVDSSRVKNRVLSPILSSSSSPGPSLETSQPICIPSPYTDIGHD
FTTIPFYSPTIFSYAGPSISDCPSVHQSLSPSLFWPSHGHMGPPIPLHRSQARPQHSQPI
QSPWVELTPRDSVLTASKSGRRRSQESEEGVVSLGGKADLHYCAVCHDYASGYHYGVWSC
EGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCCEVGMTKCGMRKEHGNY
RNSKTRRLTRLSSQSRANGPKPLTGPVEGLLNELQPPALTPEQLIERIMEAEPPEIYLMK
DMRRPLTEANVMMSLTNLADKELVHMISWAKKIPGFVELSLLDQVHLLECCWLEVLMIGL
MWRSVDHPGKLIFSPDLSLSREEGSCVQGFLEIFDMLIAATSRVRELKLQREEYVCLKAM
ILLNSNMCLSSSEGSEELQSRSKLLRLLDAVTDALVWAIAKTGLTFRQQYTRLAHLLMLL
SHIRHVSNKGMDHLHCMKMKNMVPLYDLLLEMLDAHIMHSSRLPRRTPQEESAEQKEVPA
LPPGSGSGPSNTWTPSSAGGGAEPQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcctctccagaaaaggaccagcccctgctgcagctccaggaggtggactcc
agccgagtcaaaaatcgtgtcctctccccgatcctcagctcctcctcttctcccggtccg
tctctagagaccagccagcccatctgcatcccctccccttacaccgacatcggccatgac
ttcaccaccatacctttctacagtcccactatcttcagttacgccggtcccagcatttca
gactgtccctctgtccatcagtcactaagcccctccttgttctggcccagtcacggccac
atggggccacccatacccctgcaccgctcccaggcccgaccccagcacagccagccgatc
cagagtccgtgggtggagttgacgccgcgggacagtgtcttaacagccagcaagagcggg
aggaggcgttcccaggagagcgaggagggcgtggtgtcgttgggcgggaaggcagacctc
cactactgcgctgtgtgtcacgactacgcctcgggctaccactatggagtgtggtcatgt
gaggggtgtaaggcctttttcaagaggagcatccaaggacacaatgactacatctgtcca
gcaaccaatcagtgcactatagacaagaaccgtcgtaagagctgccaggcgtgtcgcctt
cgcaagtgctgtgaagttggcatgaccaagtgtggtatgcgaaaggagcatggaaactac
aggaactccaagacgaggcgactgacccgtctgtcctcgcagagcagagctaacggacca
aagcctttaactggaccagtggagggtttgttaaacgagctgcagccgcccgcgctgacc
ccagagcagctgatcgagcgaataatggaggcagagccgccggagatctacctcatgaag
gacatgaggaggccgctgaccgaggctaatgtcatgatgtcgctcaccaacctggctgat
aaggagctggttcacatgattagctgggccaagaagattccagggtttgtcgagctcagt
ctcttggaccaggtgcacctgctggagtgctgctggctggaggtgctgatgatcggactg
atgtggaggtcagtggaccatccagggaaactcatcttctcccctgacctcagcctgagc
agagaagaggggagctgcgtccagggcttcctggagatctttgatatgctcatagctgcc
acgtccagggtgagagagctcaagctgcagagggaggagtacgtctgcctcaaggccatg
atcctcctgaactccaacatgtgcctcagctcctcagaaggcagcgaggagctgcagagt
cgctccaagttgcttcgtcttctggatgctgtaactgacgctctggtgtgggccatcgct
aaaaccggcctcaccttccgccaacagtacacccgcctcgcacacctgctcatgctgctc
tcgcacatccgccacgtgagtaacaaaggcatggaccacctccactgcatgaaaatgaag
aacatggtgcctttgtacgacttgttgctggagatgttggatgcccacatcatgcacagt
tcccgtctgcctcgccggactccccaggaggagtccgcagagcagaaggaggttcctgct
ctgcctcctggctctggaagcggaccctcaaatacctggactcccagcagcgctggaggt
ggagctgaaccccagtag
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