Lates calcarifer (barramundi perch): 108887227
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Entry
108887227 CDS
T04895
Symbol
jag2b
Name
(RefSeq) protein jagged-2b isoform X1
KO
K21635
jagged-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108887227 (jag2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_TEN
EGF_2
DSL
EGF_DL_JAG
JAG1
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
Neur_chan_memb
cEGF
PFF1_TM
DUF4381
SID-1_RNA_chan
DUF6377
V_ATPase_I
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
108887227
NCBI-ProteinID:
XP_018538033
UniProt:
A0A4W6FQL3
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All DBs
Position
LG7_1:complement(5594438..5637825)
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AA seq
1263 aa
AA seq
DB search
MWNRTRIRNCFPIVCLLLTLWTEVSQSTGYFELQLISVENVNGELADGECCDGSRSSQDL
RCTRDECDTYFKVCLKEYQMEVTTAGSCTFGAGSTQVLGGNMFSFKSVKNNPNKIDDAGK
ILIPFQFAWPRTYTLIIEARDWDNDTRSNEDELLIERSIHTGMINPGDPWQTILHDGPVA
RLTYRIRVRCDDNYYGNKCNKLCVPRNDYFGHYRCEHSGAQVCLDGWMGPDCRTAICRQG
CNLLHGSCPVPGECKCSYGWQGQFCDECVLYPGCVHGTCNVPWQCNCERNWGGLLCDKDL
NYCGRHQPCVNGGTCMNTEPDEYYCACPQGYSGKNCQIAEHACVSNPCANGGTCHEVPTG
FECQCPPGWEGLTCANNLDECASSPCARGGTCIDREDGFECVCPPQWEGKTCQIDTNECA
ENPCVNARSCKNLIGGYHCNCFKGWSGRNCVININGCHGQCKNGATCKEGAKGYHCQCPP
GFMGTHCEFQRNKCDSRPCQNGGKCHAVLDGFVCECPPEFAGQLCEVPSWSPSDACDPNP
CENDAKCHSIYQDFYCACPEGYEGKTCERLKENCQTTPCQVIDSCTVAVATNDSDGVRHI
SSNVCGPRGRCISQPAGNFTCICDPGFSGLYCHENINDCISSPCANGGTCIDGVNSFQCV
CPDGWEGRLCDHNVNECRHNPCKNGGRCVDLVNDFYCKCADNWKGKTCHSRESQCDATTC
SNGGTCYDHGDAFRCACPPGWGGNTCNTAKNSTCASSPCSNGGTCVGGGDTFTCICKDGW
EGPTCGQNTNDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRININECQSSPCAYGAT
CVDEINGFRCICPLGRTGTRCQEFIGIGKTCHYAGLQFPHGSRWEEECNNCHCINGKVDC
TKVLCGRRPCQLQSAGREQRQQSCPAGRECLKHSYLTCFSPPCHQWGVCSMAGPSPPQVT
TKCQPNSGHLDNSCVRITLVFNRDKVPPGTTVENICYELRYLPDIRSLAKDHALLLLCDI
SHLNQDAVEVAISFQPEDLPDHTLIQRAASAIEGTLSRRHNSTVMLAVTEVRVETQVIPP
SVDYLVPLLCVVFCLLCLFCIAVCVWWTRKRRKERERNSRSAADDNVNNQWEPLRLVVGR
QQQQQQQQLKESNREAEQERKKLMGPSYRTCDEGEEEEEEEEETEGELELEEECSGAEAG
KQPVYKYSKTAVQSSGGVICTLHSSSSPLKAPHRTPGYSPKDNRWKNVSAVLTGQKDLRD
HCV
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatcgcaccaggattaggaattgcttcccaatagtgtgcctgctgttgacgtta
tggacggaggtgtcccagtcaactggctatttcgagctgcagctgatctccgtggagaat
gtaaacggcgagctggcggacggggagtgctgcgacggctccaggagctcccaggacctg
cgctgcactcgagacgagtgcgacacttacttcaaagtgtgcctgaaggagtaccagatg
gaggtcaccaccgccggctcgtgcacgttcggagctggatctacgcaagttctcggtgga
aatatgttttcttttaagagcgtaaagaacaacccgaataaaatcgacgatgctggcaag
attttgatccccttccagtttgcgtggccgcggacgtacacgttgatcatagaggcccgg
gactgggacaacgacacacgcagcaatgaggacgagctgctgatcgaacgcagcattcac
accggcatgatcaaccccggcgacccctggcagaccatcctgcacgacggccccgtggct
cgcctcacatatcgcatccgggtgcggtgcgacgacaactactacggcaacaagtgcaac
aagctgtgtgttcctcgtaacgactactttggacactatcgctgtgagcattcaggggct
caggtgtgcctggatggttggatgggcccggactgtcggacagcaatctgcaggcaaggc
tgcaacctgttacatggcagctgccctgtcccaggggaatgcaagtgtagctacggctgg
cagggccagttctgtgatgaatgtgtcctgtatcctggatgtgtccacgggacctgcaac
gtcccctggcagtgcaactgtgagaggaactggggtggcctgctgtgcgataaagatctg
aattactgcggtcgccaccagccctgtgtcaacggaggaacctgcatgaacacagagcca
gacgagtactactgcgcctgtccgcagggctactccggcaagaactgtcagatagctgaa
catgcctgtgtgtccaatccctgcgccaacggtggtacgtgccacgaggttcctacaggc
ttcgaatgccagtgcccgccaggttgggagggtctgacctgtgccaacaatttggacgag
tgtgcgtccagcccgtgcgctcggggtggaacctgtatcgaccgggaggacggtttcgag
tgtgtttgcccgccgcagtgggaaggaaaaacctgccagatagatacaaatgagtgtgca
gaaaatccctgcgtgaacgctaggtcttgcaaaaatttgattggcggatatcactgcaac
tgttttaagggatggtccggacgaaactgtgtcatcaacatcaatggctgccacggtcag
tgcaagaatggagcaacatgcaaagagggtgcgaagggttaccactgccagtgtcctcca
ggtttcatgggcacccactgtgaattccagaggaataaatgcgacagcaggccgtgccag
aacggcggcaaatgccatgcagtgttggacggcttcgtgtgcgaatgtccaccggagttt
gccggacagctgtgtgaggtccctagctggtcaccgtcagacgcttgtgatccaaaccct
tgtgagaatgatgctaagtgtcacagcatttaccaggacttctactgtgcgtgtcccgaa
ggctacgagggaaaaacctgcgaacggctcaaagagaactgccagaccaccccatgtcaa
gtgattgacagctgcaccgttgctgtagcgaccaatgactcggatggggtgcggcacatc
tcctccaacgtctgcggcccgcgagggcgctgcatcagccagccggcgggaaacttcacc
tgcatctgcgatccgggtttcagtggcttgtattgtcacgagaatattaacgactgcatc
agcagcccctgtgcaaatggagggacctgcatcgatggggtgaactcctttcagtgcgtc
tgtcctgacggctgggagggtcgactctgcgaccacaacgtcaacgagtgcagacacaac
ccctgcaagaacggggggcgctgcgtcgacctggtgaacgacttctactgcaagtgtgcc
gacaactggaagggcaagacctgccattcccgtgagagccagtgtgacgcaaccacctgt
agtaatgggggcacctgctacgaccacggggatgccttccgctgtgcgtgtccacctggg
tggggaggaaacacgtgcaacacagccaagaacagcacctgcgcctccagcccttgttcc
aacggaggaacgtgcgtgggaggaggagacactttcacctgcatctgcaaagacggctgg
gaaggccccacctgcggccaaaatacaaacgactgcaaccctcatccatgttacaatggt
ggtatctgtgtggacggagtcaactggtttcggtgtgagtgtgctcctggtttcgccgga
ccagactgcagaatcaatataaacgagtgccagtcctcaccctgtgcctacggagccaca
tgtgtggatgagatcaatggcttccgatgcatctgtccgctcggtcgaacagggaccaga
tgtcaagagttcataggtattggaaagacttgccactacgctgggctgcagtttccccac
ggcagccgctgggaggaagagtgcaacaactgccactgcatcaacggcaaagtggattgt
acaaaggtgctgtgtggtcgtcgtccctgccagctccagtctgcaggccgggagcagaga
cagcagtcctgtccggctggacgggagtgtttaaagcacagctacctcacctgcttctcc
cccccttgccaccagtggggcgtttgctccatggctggaccctctcctccacaagtaacc
accaagtgccagccgaacagcgggcatttggacaacagctgtgtccgcataacacttgtt
ttcaacagagacaaagtaccaccaggaacaacagtggagaacatctgctacgagctgagg
tatcttccagacatccgaagcttggcaaaagaccacgcccttctcctgctctgtgacatc
tctcacttgaatcaggatgctgtagaggtggctatatctttccagccagaagatctacca
gaccacactctgatccagagggcagccagcgccatagagggcaccttgtcaaggcggcac
aacagcacagtaatgctggcagtcactgaggtcagagtggaaacgcaggtcattcccccc
tcagtggattacctggtgcctttgctatgcgtggtcttctgcttgctctgcctcttctgt
atcgctgtatgcgtgtggtggacgcgcaaacggagaaaagaacgcgagaggaactctcga
tctgccgcggacgacaacgtgaacaaccagtgggagcccctccggctcgtcgtgggacgt
cagcagcagcagcagcagcagcagctgaaagaaagcaacagggaggctgagcaggagcgc
aaaaagctcatgggtccctcctatcggacgtgtgatgagggggaggaggaggaggaggag
gaggaggagacggaaggcgagcttgagctcgaggaggagtgtagtggagcagaggcggga
aagcagccagtttataagtactctaagactgcagtgcagtccagtgggggagtgatctgt
accctgcacagctccagttcacccctcaaagcgccacaccggaccccaggctacagcccc
aaagacaaccgctggaaaaacgtcagtgctgtcttgactggtcagaaagacctcagagac
cactgcgtataa
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