Lates calcarifer (barramundi perch): 108887268
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Entry
108887268 CDS
T04895
Name
(RefSeq) frizzled-6
KO
K02376
frizzled 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04150
mTOR signaling pathway
lcf04310
Wnt signaling pathway
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108887268
04150 mTOR signaling pathway
108887268
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108887268
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108887268
G protein-coupled receptors [BR:
lcf04030
]
Frizzled / Smoothened family
108887268
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GFIT
Motif
Pfam:
Frizzled
Fz
FZ_RECK
DExH18_N
Motif
Other DBs
NCBI-GeneID:
108887268
NCBI-ProteinID:
XP_018538089
UniProt:
A0A4W6E1T4
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Position
LG15:30152199..30162041
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AA seq
712 aa
AA seq
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MLMPGPLWVCLALIWVGSCSTHSLFTCEPIKVHRCLGMPYNMTFFPNMMEHYDQDIAASN
MEPFMPLANLRCSPDVHHFLCQAFVPACTEENNVIPPCREQCETVLSDCEENIRIFGITW
PPELQCDKLDSCSRSDGSALPATTPVISSSSAKRDLGFWCPLQLKTKPGHGSSFLGAQDC
APPCSNMYFKPHDIEFAKSFIGVCSIICLGATLFTFLTFLIDVKRFRYPERPIIFYAVCY
SFVSLIYFIGFLLGNNAACTKAAHPPGVDTVVLGSQSKGCTLLFMLLYFFSIAGIVWWVI
LTITWFLAAGPKWSCEAIEKKAVWFHSAAWGIPGALTVMLLALNKVEGDNISGVCFVGLY
DLDALRYFVLAPLCVGVIVGLFLILAGIVSLNHVRQVIQHDERNQEKLKKFMIRIGVFSC
LYLVPLVTLLACYTYEQSHRSTWENTWINDRCQEYSIPCSYKTTEHDRPDLSLFLVKYLM
TLVVGISAVFWVSSKKTCSEWAYFFNRTRKRDPISESRRVLQESCEFFLKHNSRVQHKKK
HYKPSSHKLKVISKSMGTSTGAAPTTASTAGNTTNQGASAVGNHEPHLQGSLSETSAREH
LNRGASSRSSRRGERERDRERDRDREREREGGERRSKGGSSSKVSSRSESMHRVPDGRMT
PRSELSEARQVPSGQQHSALNRSHSSSIIQDSTHQLVHQVLEESKDTKDSSC
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgccaggaccactgtgggtgtgcctggcactgatatgggtgggaagctgcagt
acccacagcctgttcacctgtgagccaatcaaagtgcatcgatgcttggggatgccctac
aacatgactttctttcccaacatgatggagcattatgatcaggatattgctgccagcaat
atggagccattcatgcccttggcaaacctgcgctgctctccagacgtccaccactttctt
tgccaagcttttgtcccagcatgcactgaggagaacaacgtgatccctccatgccgagag
cagtgtgagactgttctgtccgactgcgaagagaatatccgcatctttggtatcacctgg
ccccctgagctgcagtgtgacaaattggattcatgtagccgctctgatggctcagcactt
cctgcaaccacgccagtgatctcttcctcgtcggctaagagggacctgggcttctggtgt
cctctgcagttaaagacaaaaccaggccatggatcgtcgttcctcggcgcccaggactgt
gctccgccttgctccaacatgtacttcaaaccccacgacattgagtttgccaagagcttc
atcggtgtgtgctccatcatctgcctgggcgccacactcttcactttcctcactttcctc
atcgacgtcaaacgtttccgctatcctgagcgccccataatcttctatgccgtctgctac
agctttgtctcgctcatatacttcattgggttcctgctgggaaataatgcagcctgtact
aaggcagcacatcctcctggtgtggatacagtggtgcttggctctcagagcaaagggtgt
actttgctttttatgctcctttactttttctccatcgctggtatcgtctggtgggtcata
ctcaccatcacctggttcctggcagctggacctaagtggagctgtgaggccatagagaag
aaagcggtatggttccactctgctgcctgggggatccctggggcactaacagtcatgctg
ctcgctctgaacaaggttgaaggggacaacatcagtggagtttgtttcgttggactctat
gacctggacgccctgcgctactttgttctggctccactgtgtgtgggcgtcatagtcggc
ctcttcctcatcctggctggcattgtttctctcaatcatgtccggcaggtcattcagcac
gacgagcgcaaccaggagaagctgaagaagttcatgattcgcattggtgtgttcagctgc
ctctacctggtccccctggtcaccctattagcctgctacacctacgaacagagtcaccgc
agcacctgggagaacacctggatcaacgaccgctgtcaggagtacagcatcccctgttcc
tacaagacaacagagcacgaccgtcctgacctctctttgtttttggtgaaatacttgatg
acgttggtggttggaatatctgcagtgttctgggtcagcagcaaaaagacgtgctctgag
tgggcttacttcttcaacaggacccgcaagagagatcccatcagcgagagtcgccgggtg
ctccaggagtcctgtgagttcttcctcaagcacaacagccgtgtccagcacaagaagaag
cactacaagcccagctcccacaagctcaaggtcatctccaagtccatgggcacaagcaca
ggcgctgctcccaccactgcctccaccgccggcaacaccaccaaccaaggagcctctgca
gtgggcaatcacgagccccatctgcaaggttctctgtctgagacctcagccagagagcac
ctgaacaggggcgcctccagccgaagctccagaaggggggagagggagagggacagggag
cgggaccgagacagggagagggagagggagggaggagagagacgcagcaaaggtgggagc
tccagtaaggtcagcagccggtcagagagcatgcacagagttccagatgggaggatgacc
ccgaggagcgagctgtcagaggccagacaggttcccagtggacagcaacattcagcttta
aaccgatcacacagcagcagcatcatccaagactccacccaccagctggtgcaccaggtg
cttgaggagagcaaggacacaaaggacagcagctgctga
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