Lates calcarifer (barramundi perch): 108887274
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Entry
108887274 CDS
T04895
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108887274
03037 Cilium and associated proteins [BR:
lcf03037
]
108887274
Transporters [BR:
lcf02000
]
Other transporters
Pores ion channels [TC:
1
]
108887274
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108887274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108887274
NCBI-ProteinID:
XP_018538095
UniProt:
A0A4W6D3Q6
LinkDB
All DBs
Position
LG15:11021879..11028459
Genome browser
AA seq
682 aa
AA seq
DB search
MASEPQGQGSGNCFPDEHQSLRFRRVSSRVSNQNYPQFNWNSTPADEDGGGDSGPRRDLK
SIPLPMSLKRAVRQVQQMQVPVVSSVESWKRKKSKSLCKLKNATREFLYFFELWSKSLQK
IGGNFGGGVQSYFLFLRFLVVLNFVSFSLIAGFVLIPSIIFRSAGSSPVNNTGPEACMEY
DPNPQGLVVFYNYFLDLLSGTGFMEYSYLFYGYYNNTMVEDRNFSYNIPLAYLFTAVFYF
AFCLICIIARMGTAARVAVATGGSAVGNYSMIVFTGWDYGCLGDRATKLKQKNIHYRLQV
DLEEERIKKQAAALTLCQKILLYSLRVFMFFLALGLIIAAFYGISEATNFSQERSDEQGI
LGLIFEYLPSIVITTGNFVVPLLCDQIALIERYTPSTTIIVALLRAVFLRLVSLGVLLFT
LWRQITCKGDTNNKACELCQYNHEVYQCWETRVGQEMYKLTLFDLLINIAVLVLVEFPRR
MVVDNWSSKLAQWVGRQEFVVPSNVLGLVYGQTVVWTGALFCPLLPLINAIKFVILFYCK
KITLFYNCRPALKTFRSTTSTFFFLVVLLFGWGLATVVMIYSLAEIRPSMGCGPFRFFPT
MWSIVPTSFHSLSETTKEFLFFIGSQAFSIPLFALSCVVMCYFIALASVHGKSVALLRAQ
LKLEGRDKQFLVKQIEELSRQL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaccacagggacaaggctcagggaattgtttccctgatgagcatcagtca
ctgaggttccgaagggtttcatctcgagtgtccaatcagaattaccctcagttcaactgg
aactcgacccctgcagacgaggatggggggggcgacagtggaccgcgccgggacctcaag
agcatccctctccccatgtctctgaaaagagctgtgaggcaggtgcagcaaatgcaggtg
cctgtggtttccagtgtggagtcatggaaaaggaagaagtccaaatctctgtgtaaactc
aaaaacgccaccagagaatttctctactttttcgaactgtggagcaagtctttgcaaaaa
attggagggaactttggaggtggtgtccagtcttacttcctgttcctgcgattcttggtg
gtgctcaattttgtttccttctctctgattgctggatttgtcctcatccccagcatcatc
ttcagatctgctgggtccagccccgtcaacaacaccggtccagaggcatgcatggagtat
gaccccaatcctcaaggcctggtggtgttctataattatttccttgacttactttcggga
acgggttttatggagtattcatacctgttttacggctactacaacaacacaatggtggag
gacaggaacttctcctacaacatccccctggcctacctcttcactgctgttttctacttt
gccttttgtctcatttgcatcattgcacgcatggggaccgcagctcgagttgctgtggca
acgggaggcagcgctgtgggcaactacagcatgatagtgttcacgggctgggactacggt
tgcctgggagaccgagcgaccaagctaaagcagaaaaacatccactaccggctgcaggtg
gacctggaggaggagaggataaagaaacaggcagctgctctgactctgtgtcaaaaaata
cttttatactctctacgtgtttttatgtttttccttgcactcgggctcattatagcagcc
ttctacggcatctctgaggccaccaacttcagccaggaaagaagtgacgagcaagggatc
ctgggtttgatttttgagtatcttccctccattgtcatcaccactggaaactttgtggtg
cctctgctgtgtgaccagatcgccttaatagagagatacacccccagcactaccatcata
gtggcactattaagggcagtgttcctgcgtctggtgagtctgggcgttctcctcttcacc
ctgtggcgtcagatcacctgtaagggggacacaaacaataaagcctgtgaactgtgccaa
tacaaccatgaggtctatcagtgctgggaaacacgagtgggacaggagatgtacaagctg
acgctgtttgacctcttaatcaacattgctgtgctcgtcctggtggagtttccacgcagg
atggtggtggacaactggtccagtaagctggctcagtgggtgggtcggcaggagtttgtg
gttccttccaacgtgcttggtctggtttacggtcagactgtggtttggacaggagctctt
ttttgccctctgctgccactcatcaacgccatcaagtttgtcatcctcttctactgcaag
aagatcacactcttctataactgtcgaccagcactgaagacgtttcgctccaccacctcc
accttctttttcctggtggtactcctgtttggctggggcctggccacagttgtcatgatt
tacagtctggctgagatccgtccgtctatgggttgcggtcctttccgtttcttccccacc
atgtggtcgattgtcccaacctctttccacagcctctctgaaactacaaaggagtttcta
ttcttcatcggctcccaggcgttctccatccctctgtttgccttatcatgtgtggtgatg
tgctatttcatagccttagcctcagtccatgggaaaagtgttgctctgctaagagcgcag
ctaaaactggagggccgtgacaagcagttcttggtgaagcagattgaggagctgagtcga
cagctttag
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