Lates calcarifer (barramundi perch): 108887281
Help
Entry
108887281 CDS
T04895
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108887281
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108887281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_SCAP
WD40_RFWD3
MIOS_WD40
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108887281
NCBI-ProteinID:
XP_018538107
UniProt:
A0A4W6D3P5
LinkDB
All DBs
Position
LG15:10974407..10979927
Genome browser
AA seq
453 aa
AA seq
DB search
MSAPDEDTFAEEGGEMDEMDEAGSDDDEGVEMEEEGADGDGERKVYVPGIEPLQPGEELE
MDRSAYRMYHECQTGAPCLSFDVLRDGDGEGREQFPLSMLLCAGTQADTALSNRLLVMRM
YNLHGTEKEKEGEESSDEESDDDEEDEDKKPQMELAMMPHYGGINRVRVTQRGEQSLAAV
WSEKGQVEIFDLRPQLEAVHNSAAMEAFIKQQKEATALFSFSGHMTEGFAIDWSPTVPGR
LISGDCKKNIHVWEPREGGTSWQIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRI
WDIRAPPNSMLSANEAHSSDINVISWNRSEPFLLSGGDDGLLKVWDLRQFKSGRPVANFK
QHSAPITSVEWNPVDSSVFAASGADDIISQWDLSVESCDVGARVEGVKDLPPQLLFLHQG
QSEIKEIHWHPQIPGVMISTALSGYNVFRTISV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccccgatgaagacacgtttgccgaggaaggaggcgaaatggacgagatggac
gaagccggcagcgacgacgacgaaggggtagagatggaggaggaaggagcggacggagac
ggggagaggaaagtgtacgtgcccgggatcgagccgcttcagccgggagaggagctggag
atggatcgctccgcgtaccgcatgtaccacgagtgtcaaacaggtgctccgtgtctgagc
ttcgacgtcctgagagacggagatggagaaggcagggaacagttccctctgtccatgctg
ctctgtgcgggcacacaggcggacacagctctgagcaacagacttcttgtcatgcgcatg
tacaaccttcacggaacagagaaagaaaaagagggggaagagagcagtgatgaagaaagt
gatgacgatgaagaggatgaagataagaagccacaaatggagctggccatgatgcctcac
tatggaggcattaacagagtcagagtgacccagcgtggagagcagtcactggctgctgtc
tggtcagagaagggacaagtagaaatatttgacctccgacctcagctggaggccgttcac
aactctgctgccatggaagcgttcatcaaacagcagaaggaagccacagctctcttcagt
ttctcaggacacatgactgaaggctttgcaattgattggtcacctacagttcctggtcgt
cttatcagtggagactgcaaaaagaacatccatgtgtgggaaccacgggagggagggacc
tcatggcagattgaccaacgacctttcagctcccacagcaagtctgtggaggatctgcag
tggtctcctactgaagctaccgtttttgcatcttgttcagtggatcagtctattcgcatc
tgggacatccgtgcaccgcccaattcgatgctctcagccaatgaagcacactcatcggac
atcaatgtgatcagctggaacaggagcgaaccattcctgctgtcaggaggggacgatggg
ctgctgaaagtctgggacctgcgacagtttaagagcgggcggcccgtggcaaacttcaag
cagcacagcgcccccatcacttcggtggagtggaaccccgtggactcgagcgtgttcgcc
gcctcgggagcggatgacatcatcagccagtgggatctgtccgtggagtcatgtgacgtg
ggcgccagggtggagggggtgaaagacttaccccctcagctgctgttcctgcaccagggt
cagtcagagattaaggagattcactggcacccacagatacctggtgtgatgatctccacg
gctctgtcaggatacaatgtgttcaggacaatatctgtgtag
DBGET
integrated database retrieval system
