Lates calcarifer (barramundi perch): 108887426
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Entry
108887426 CDS
T04895
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 45 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108887426
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108887426
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108887426
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108887426
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108887426
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108887426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
108887426
NCBI-ProteinID:
XP_018538368
UniProt:
A0A4W6E534
LinkDB
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Position
LG15:29809062..29841876
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AA seq
810 aa
AA seq
DB search
MRLKDPFSLKAADMTKRTNKPRKPRDEESSDEVSGLTCQHVSKAVDLSSVKKSVLSSVWL
VCSECLKERTMIDGEPAASHDILVCLKCGFQGCNHTGIQHAVKHYQAFHPESHCITISLS
TWKAWCFECNEELSTHCNKKALAQSLDFLQKHSVKATSAASPKIIKLREEPSDYTEPPRG
KSPVINSTLVPVKGINNLGNTCFFNAVMQNLSQTHMLIDLIQEVKEKGYKLRICPPVETN
LSPLTVTLPSPEPLTAAMFLFLQSMKESGKGPINPKILFNQLCQKAPRFKGYQQQDSQEL
LHYLLDSIRVEETKRVKAGILKAFNNPTEKTADEETKRQVKAYGKEGVKMNFVDRIFVGE
LTNTIMCEECEHISTVKEAFIDISLPIIEERMSKPSNPGRLGKGSREQDTHMAHSDQVLS
AAHSVNRNTRKLSGQKQQSRRASSSVEEKGAGCGAERPEEEVVAGGSARGVTVCKMAAAG
SLSDGSERDSGAQDSSNDADSEASESEWAPRTSSSSHGHGHMSTPSSTSTLTPSPTPISA
SSPTSSSSTRQGGPVEQLVTAVSKVNLGFSSGDCSPSTHCSPEELGETQSRDNLHHQHHQ
GAFQALSHSYTPSSKECSIQSCLHQFTSVELLMGNNKLLCESCTERRQKQLRKSSSADKK
VEKIYTSARKQMLISSLPPVITLHLKRFHQAGMNLRKVNRHVDFPLILDLAPFCSASCKN
LAAGERVLYSLYGIVEHSGSMRGGHYTAYVKVRTPQRKTDQHHRNLSGAREASSSSQGQW
VYVSDTTVQSVPESRVLNSQAYLLFYEEML
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcggctaaaggatcctttctcattaaaagccgccgatatgaccaagcggactaataaa
ccaaggaaacctcgagatgaagagtcatcagatgaagtcagtgggttgacttgtcaacat
gtgagtaaggcagtagacctgagctcagtgaagaagtcggtgctctctagcgtgtggttg
gtgtgctctgagtgcctaaaggagaggaccatgatcgatggagagccagcagcatcacat
gacatcctggtttgcttaaagtgtggtttccagggctgtaaccacactgggattcagcat
gctgtcaagcactaccaagctttccacccagagtctcactgcatcaccatcagcttgagc
acatggaaggcctggtgttttgaatgtaatgaggagctctccactcactgtaacaagaag
gctttggctcagtccctggactttttacaaaagcactctgtcaaggcaacatcagctgca
tcacccaagatcatcaagctgcgagaggaaccatcagattatactgagccacccagaggc
aagagcccagtcatcaacagcaccttggtccctgtcaaaggcatcaataaccttggtaac
acatgcttcttcaacgctgttatgcagaacttatcccagacgcacatgctcattgacctt
atccaggaagtgaaggagaaaggatacaaactgaggatctgcccccctgtcgagaccaat
ctgagtccattgacggtaacgcttcctagtccagagccactgactgcggccatgtttctc
ttcctccagagcatgaaagaatcagggaaaggcccaattaatcccaagatccttttcaat
cagctttgccagaaagctccacgtttcaagggctaccaacaacaagacagccaggagctt
ctacactatttactggactccatacgagtagaagaaactaaaagggtgaaagcaggcatt
ctgaaagctttcaacaaccccacagagaagacagcagatgaggagaccaaacgacaagtt
aaagcatacgggaaggaaggtgtgaagatgaactttgttgaccgcatctttgtaggcgaa
ctgaccaacacaattatgtgtgaagagtgtgagcatatctccacggtaaaggaggctttc
atagacatctctttacccatcatagaggagaggatgtcaaaaccatccaatcctggtagg
ctggggaagggcagcagggagcaagacacccacatggctcacagtgaccaggttctttct
gcagcacactctgtaaaccgaaacaccaggaagctgagtggacagaagcaacagagcagg
agggcttcaagttctgtggaggagaagggagcaggctgcggtgcggagcgaccagaggag
gaggtagtagctggtggatcagctcgtggtgtcacagtttgcaagatggccgctgcgggc
agcctatcagatggcagcgagagagactcaggtgctcaggacagcagcaatgacgcagac
agtgaggcctcagagagtgagtgggccccacgcacctcctcctccagccacgggcatggg
cacatgtccaccccatcatccacttccaccctcactccatcccctacgcccatctctgcc
tcctcccccacgtcatcatcctccacaaggcaaggtggtcctgtagagcagctagttact
gcagtgtctaaagtcaacctgggcttcagttccggggactgctcaccttccacgcactgt
tctccagaggaactgggagaaacacagtcacgagataacctccaccatcaacaccaccag
ggagccttccaggcgctgtcccacagttacacaccaagctccaaggagtgctccatccag
tcctgcctccaccagttcacctctgtggagttgctgatgggcaacaacaagctgctgtgt
gagagctgtacagaacgcagacagaaacagctgcgcaagagcagctcagctgataagaag
gtggagaagatttacaccagtgccaggaagcaaatgctgatatcctcgctgcctccagtc
atcactttgcatcttaaacgcttccaccaggcagggatgaacctacgaaaggtgaaccgc
catgttgactttcctctgatcttggatctggctccattctgttcagcatcctgcaagaat
ctggcagccggtgagcgtgtcctctacagtctgtatgggattgttgaacatagtggctca
atgcgggggggccactatactgcatatgtaaaagtgcgcactccccagaggaaaacagat
cagcaccacaggaacctgtcaggtgcgagggaggccagcagcagctcccagggccagtgg
gtgtacgtcagtgacaccacggttcagtcagtaccagagtcaagggtactcaactctcag
gcatacctgctcttctacgaggaaatgctgtaa
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integrated database retrieval system
