Lates calcarifer (barramundi perch): 108887525
Help
Entry
108887525 CDS
T04895
Symbol
vamp1a
Name
(RefSeq) vesicle associated membrane protein 1a
KO
K13504
vesicle-associated membrane protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108887525 (vamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108887525 (vamp1a)
Membrane trafficking [BR:
lcf04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
108887525 (vamp1a)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108887525 (vamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
SpoIIM
MCU
Orf78
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
108887525
NCBI-ProteinID:
XP_018538510
UniProt:
A0A4W6FLJ7
LinkDB
All DBs
Position
LG3:21095302..21100997
Genome browser
AA seq
117 aa
AA seq
DB search
MSTPDAAGTPGAPGEGEGGPAASAPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQK
LSELDDRADALQAGASQFESSAAKLKNKYWWKNCKMMIIMAVIGIICVGVIFLYFFY
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccagacgcagcaggtactccaggagctcccggggagggcgaggggggcccc
gcggcttcggccccgaacctgacgagcaacagacgactgcagcagacgcaggcgcaggtg
gacgaggtggtggacatcatgcgtgtgaacgtggacaaagtcctggagagagaccagaag
ctgtcggagctggacgaccgggccgacgccctgcaggctggagcctcgcagttcgagagc
agcgctgccaaactcaagaacaagtactggtggaaaaactgcaagatgatgatcatcatg
gctgtaataggtattatatgtgtcggagtcatcttcttgtatttcttctactga
DBGET
integrated database retrieval system
