Lates calcarifer (barramundi perch): 108887593
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Entry
108887593 CDS
T04895
Name
(RefSeq) zinc fingers and homeoboxes protein 1
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108887593
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
108887593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
zf-C2H2_7th_ZNF462
zf-H2C2_5
zf-C2H2_ZNF462_11
Actin_micro
Motif
Other DBs
NCBI-GeneID:
108887593
NCBI-ProteinID:
XP_018538571
UniProt:
A0A4W6BP94
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All DBs
Position
LG3:complement(21907595..21919429)
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AA seq
977 aa
AA seq
DB search
MASRRKSTTPCMVPPRETVDSDQEMEDVAEAVEPEDSNGVVAVSSEVCGLPEERGEEADV
RQASDPYLDLNMAEGGYECKYCSFQTSELNLFTMHVDTEHPDVVLNTSYVCMECDYHTKS
YDTLLAHNARLHPGEDNFTRTMVKRNNETIFQQTVNDLTFDGSFIKVEDDEAEETSRKGI
ALSKTPIMRIKSRPEPKKFAAAHKMAIDDVIKVESDDEDDENKEPPTLSPAPMTPAAVTA
PRLIPVSAPVQVQAVPQSIVVNSPNVLQIKGGSGGSAVLPPGTLAQVLSALQNQQSSPQT
QTQLLIPISSIPTYNTAMDNNVLLVSAYNRFPYPSVSEIMGLSSQTKFSEEQIKVWFSAQ
RLKHGVSWTPEEVEEARRKKFNGTVQTVPQTITVIPANIAAATNGLQSIFQTCQIVGQPG
LVLTQVAGNGSTVPVASPITLTVAGVPGNQPKAAEPSTSESKTEMSASSVSTPLGLDAGA
VKPKKSKEQLAELKASYSRRQFATEAEISRLMQVTKLSKRAIKKWFSDTRYNQRNSKDHH
GVLLSETPSSRAVVSAGGKVGRQSSVSLNDSNNSDNTTTIVIDSSDDASDSSPTSANAPG
SSGSTSYPRVKFRHAFPDFTPQKFKEKTPEQLLILEASFQKSDTPSDEELSRLRAETKLT
RREVDAWFTERRKMPSAGQLKDGDVDGGDLEKAKPATVPSSSAQERQTTPPAGRKMMKKT
PEQLHILKKAFVRTQWPTSEEYDQMAEESGLPRTYIVNWFGDTRYACKNSNLKWYYLYQS
GKVDEALNGGAKSQKKSRKRFRGWSRRTRRPYPCKRSPQEGATAIKVKSGKAFLKDYYLK
HRALSEKDLDDLVTKSSMSYEQVRDWFSEAARRAEEGREPFSDEEAEGEEVEVEGEEDDD
EEEEEEEEAAAAEHGDSEGEMEVKEQGEEATDDDCNEEEEEEEKEEEEDAEEVEDDETIQ
EESEGVSQSQPQAEEQT
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaggaggaaatccaccactccctgcatggttcctcctcgagagaccgtcgac
tcggaccaggagatggaggatgtcgcggaggcagtggagccggaggacagcaacggcgtg
gtggccgtctcctcagaggtctgcggcctgccggaggagcggggcgaggaggccgacgtc
aggcaggcgtcggacccctacctggacttgaacatggcggaagggggatacgagtgcaaa
tactgcagcttccagacatcagagctcaacctgttcaccatgcatgtggacacggagcat
cccgacgtcgtcctcaacacgtcctacgtctgcatggagtgtgactaccacacaaagagt
tatgacacgctactggcccacaacgctcgcctccaccccggcgaggacaacttcacgcgg
acgatggtgaagcgaaacaacgagaccatcttccagcagacagtcaacgacctcaccttc
gacggcagcttcatcaaagtggaggacgacgaggcagaggagacgtcccgcaagggcatc
gccctcagtaagactcccatcatgaggatcaagagcagaccggagcccaagaagtttgcc
gcagcgcacaaaatggccatcgatgacgtcatcaaagtggagagcgacgacgaggatgac
gagaacaaggagccgcccaccctgtcacccgccccgatgacgcccgccgccgtcaccgcc
cctcgcctcatccccgtctctgcgccggtgcaggtccaggccgttccgcagagcatcgtg
gtcaacagccccaacgtgctgcagattaaaggcggctcgggtggcagcgccgtgctgcct
ccagggacgctggctcaggttctgtcggccctgcagaaccagcagagcagcccccagacc
cagactcagcttctcatccccatcagcagcatccccacctacaacacggccatggacaac
aacgtcctgctggtcagcgcctacaacaggtttccgtacccctcagtgtccgagatcatg
ggcctgtcctcacagaccaagttcagcgaggagcagatcaaggtctggttttctgctcag
aggctcaaacacggagtcagctggacgccggaggaggtggaggaggcaaggaggaagaag
tttaatggcacggtgcagaccgtccctcagaccatcaccgtcatccccgccaacatcgcc
gctgccaccaacggcctgcagtccatcttccagacgtgtcaaatcgtcgggcagccgggc
ctcgtcctcacccaggtggccggtaacggcagcaccgtgccggtcgcctcacccatcacg
ctgacggtggcgggcgtccccggcaaccagccaaaagccgccgaaccgtcaacgtcagaa
tccaaaacggagatgtcagcttcttcagtcagcacgccgctcggtttggatgcaggggca
gtgaaaccgaagaagtccaaggagcagctggcagagctgaaggccagctacagcaggagg
cagtttgccactgaggcggagatctctcggctcatgcaggtcaccaaactctccaaacga
gcaataaagaagtggttcagcgacacacgctacaaccagaggaactcaaaggatcaccac
ggcgtcctgctgagcgaaaccccgtccagcagagcggtggtgtcggccggaggcaaagtg
ggaaggcaaagcagcgtgagccttaatgacagcaacaacagtgacaacactaccaccatc
gtcatcgactccagcgacgatgccagcgactcctctccaacgtctgccaacgccccaggg
tcgtccggttcgaccagctacccgcgggtcaaattccgccacgccttccctgacttcacg
ccgcagaagttcaaggaaaagacgccggagcagctgctcatcctggaggccagcttccag
aaatcagacacaccttctgacgaggagctgagtcggctgcgagcggagacgaagctgaca
agacgcgaggtggacgcttggttcaccgagaggcggaaaatgccctcggcggggcagctg
aaagacggagacgtcgacggaggggacttggagaaggcgaaaccggccactgtgccttcg
tcctcggctcaggagaggcagacgactcctcccgctggcaggaagatgatgaagaagaca
ccggagcagctccacatcctgaagaaggcgtttgtccgcacacagtggcccacatctgag
gagtacgaccagatggcggaggagagcggcttaccgaggacgtacatcgtcaactggttc
ggagacacgcgctacgcctgcaagaacagcaacctgaagtggtactacctctaccagagc
gggaaggtggacgaggcgctgaacggtggagccaagagccagaagaagtccaggaagcgt
ttccgcggttggtccaggaggacgcgtcgaccgtatccctgcaaacgttcgccacaggag
ggtgccactgccatcaaggtgaagtccggtaaggcgtttctgaaggactactacctcaaa
caccgagccctgagcgagaaagacctggacgacctggtgacaaagtccagcatgagctac
gagcaggtgagggactggttctccgaggccgccaggagagcggaggagggcagggagccc
ttcagcgatgaggaggcagagggagaggaggtggaggtggagggtgaggaggatgacgac
gaggaggaagaggaagaagaggaggcggcggcggcagagcacggagacagcgagggagag
atggaggtgaaggaacaaggagaggaggccacagacgacgactgcaacgaggaggaagag
gaggaagagaaggaggaggaggaggatgcagaggaggtggaggacgatgagacaattcag
gaggaatctgaaggtgtcagccaatcacagcctcaggcagaggagcagacatga
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