Lates calcarifer (barramundi perch): 108887627
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Entry
108887627 CDS
T04895
Name
(RefSeq) ileal sodium/bile acid cotransporter
KO
K14342
solute carrier family 10 (sodium/bile acid cotransporter), member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108887627
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
108887627
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBF
DUF5389
Motif
Other DBs
NCBI-GeneID:
108887627
NCBI-ProteinID:
XP_018538593
UniProt:
A0AAJ7V755
A0A4W6EIU6
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Position
LG1:complement(7950812..7959498)
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AA seq
472 aa
AA seq
DB search
MQLMDAEPPKARHCSDCTHIVYSRYTVAPVAFILNGLKLVLSGCPLTLKSSITPFRGTHS
SAGLCKDIGEGVSWNQSLLSGYQPLIVSFSSMTLSTMSMFKVKTVVPLACDSVATVCSGP
NCLVPPSDSNAVLSLVLSTVLTVMLAMVMFSMGCTVDTKKLWGHIKRPWGIVIGFLCQFG
IMPFTAFALSLAFGVLPVQAVVIIIMGCCPGGSGSNIICYWLDGDMDLSISMTACSSILA
LGMMPLCLLIYTSIWTSTSTIQIPYDSIGITLLALLVPITFGMYVKRRWPHKAKKILKVG
SIAGFGLIIIIAVVGGILYQSSWTIAPSLWIIGTIYPFIGFGLGFLMARFVGQPWYRCRT
IALETGFQNSQLCSTIVQLSFNPAELEVMFAFPLIYSIFQLVVAVISVGAYQAYKKSCHR
SADEDSEALSVEDGDGERAKEKELAVENNTFECDENGNSEEKGKDIEKNTQL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaatggatgctgagcctcccaaagctcgtcactgttcagactgcacacacata
gtatacagcagatacacagtggctccagtagcttttattctaaatggtcttaagttggtg
ttgtctggttgtcctttaactttaaagtcaagcattactcccttcagagggacacactct
tcagcaggactctgcaaagatattggagaaggagtctcctggaatcagagtcttctctca
ggttatcagccgctcatcgtctccttctcctccatgacactgtccaccatgtccatgttc
aaggtgaaaactgtggttcctttagcctgtgactctgtggccacagtctgttcaggtcca
aactgccttgttcctcccagtgactccaatgctgtgctgagcctggtgctgagcacggtg
ctcactgtaatgctggccatggtcatgttctccatgggctgcactgtggacaccaaaaag
ctgtggggccacatcaagaggccatggggcatcgtcatcggcttcctctgccagttcggc
atcatgcctttcacagcctttgccttgtcactggcctttggtgtgctgcctgtccaggcc
gttgtcatcatcatcatgggctgctgtcctggaggatctggctctaacattatctgctac
tggctggacggagacatggacctcagtatcagtatgacagcttgttcttctatcctggcc
ttggggatgatgcctctctgtctgctcatttacacctccatctggacctccaccagcacc
atccagatcccatatgacagcattggaatcactctgttggcccttcttgtcccgatcacc
tttgggatgtacgttaaacgtcggtggccccacaaggcaaaaaagatcctcaaggtgggg
tccatcgcaggcttcggcctcatcatcatcatcgctgtggttggaggaatcctctaccag
tcgtcgtggaccatcgcgccctctctgtggattatcggcaccatctacccctttattggt
tttggcctggggttcctcatggcccgctttgtgggtcagccctggtacagatgtcgaacc
atcgcactggagacgggtttccagaactcccagttgtgcagcaccattgtccagctgtcc
ttcaaccctgctgaactggaagtcatgtttgccttccccctcatctacagcatcttccag
ctggtggtggcagtcatatctgtgggagcctaccaggcatataaaaagtcatgtcaccgt
tcagctgacgaggacagtgaggctctatcagtggaagatggtgatggagaacgggccaaa
gagaaggagctcgctgtggagaataacacctttgaatgtgatgagaatggaaacagtgaa
gagaagggtaaggacatcgaaaagaacacccagctgtga
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