Lates calcarifer (barramundi perch): 108887639
Help
Entry
108887639 CDS
T04895
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcf00535
]
108887639
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108887639
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
108887639
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Others
108887639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Serglycin
Motif
Other DBs
NCBI-GeneID:
108887639
NCBI-ProteinID:
XP_018538608
UniProt:
A0A4W6C9B3
LinkDB
All DBs
Position
LG2:4302923..4428858
Genome browser
AA seq
570 aa
AA seq
DB search
MYAMWRLQVALCTLSLLSLSSGGESKARSCSEVRQAYNAKGFSLVNVPHQEISGEHLRVC
PQGYTCCTSEMEDKLNQQSKLEFENLVEESSHNMRTTFVSRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
VPACVRALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDPEWNLFIDAMLLVAD
RLEGPFNIEAVIEPIDIKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGIGRSARGISDVF
SARFRPYTPEERPTTAAGTSLDRLRVVWRTMQHSVIDIKEKLKESRRFWSNLPDDICAKG
KLTESDEEQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTN
KLRNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTEFVFVGTEAPVIGADRSDERAAAAA
AGKSLSCGPSLLLVMAALSLPLWAMQTQLR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaagtcgccttatgcactctgtcgttgctgtccctgtca
tctggtggtgaaagcaaagcgcggagctgtagcgaggttagacaagcttataacgctaaa
ggattcagcctcgtcaatgtacctcatcaggaaatatcaggtgagcacctgcgtgtctgt
cctcagggatacacctgctgcacgtccgagatggaggacaaactcaaccagcagagcaaa
ctggagttcgagaacttggtcgaggagagcagccacaatatgaggacgacatttgtctcg
aggcataaaaagtttgacgagtttttcttggagctgctggacaattctgagaagtctcta
aacagtatgttcacgcggacatacgggaagctgtatatgcagaactcggaggtgttccag
gacctgttcactgagcttaagcgctactacacagggggcaacgtcaacctggaagagatg
ctgaatgacttctggtccaggctgcttgagcgcatgttccagttactcaactcccagtac
cacttcacagacgactacctggagtgcatcagtaaatacacagatcagctgaagccgttt
ggggatgtgcccaggaaactcaaggctcaggtcaccagagccttcatcgctgcacggact
tttgtccaggggctaatggtgggtcgggaggttgccaacagggtcgccaaggtgaatgta
gtcccagcgtgtgtcagagccctgaccaagatgctgtactgcccatactgtcgtggcatg
cctggactgaaaccctgtcacaactactgccacaacgtgatgaggggctgtctggcgaac
caagcagacctggatcctgaatggaacctcttcatcgatgctatgttactggtggcagac
agacttgagggacccttcaacattgaagcggttatagagccaatcgacatcaagatctct
gaggctatcatgaccatgcaggacaacagcatgcaagtgtcagccaaggtttttcaaggg
tgtggccaaccaaagccatcaggaataggaaggtctgcacgtggcatctcagatgtgttc
agtgctcgcttcagaccctacacccctgaagagaggccaactactgcagctggaacaagc
ctggatagactgagggttgtctggaggacaatgcaacacagtgtgattgacatcaaagag
aagctgaaggagtccaggaggttctggtccaacctgccagacgacatctgtgccaagggc
aagctcacagagtctgacgaggagcagtgctggaacagccacactaagggcaggtatttc
cctgaggtggtgaaggagggtctaaccaaccaagtgaacaacccagaggtggatgtggat
atcaccaggcctgacacgctgattcggcagcagatcatggctctacgtgtcatgaccaac
aagctaaggaacgcctacaatggaaatgacatctacttccaggactccagtgatgagggc
agtagttctggcagtggcagcggctgctctgacggctgcacgacagagtttgtctttgtt
ggaacagaggctccagtaatcggagctgacaggagcgatgaacgcgcagcagcagccgcc
gcaggcaagtcgctttcctgtggaccctccctactgctggtgatggctgccctctcactc
ccactttgggcaatgcagactcaattgagataa
DBGET
integrated database retrieval system