Lates calcarifer (barramundi perch): 108887657
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Entry
108887657 CDS
T04895
Name
(RefSeq) N-acetylgalactosamine-6-sulfatase isoform X1
KO
K01132
N-acetylgalactosamine-6-sulfatase [EC:
3.1.6.4
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00531
Glycosaminoglycan degradation
lcf01100
Metabolic pathways
lcf04142
Lysosome
Module
lcf_M00077
Chondroitin sulfate degradation
lcf_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108887657
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108887657
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.6 Sulfuric-ester hydrolases
3.1.6.4 N-acetylgalactosamine-6-sulfatase
108887657
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GFIT
Motif
Pfam:
Sulfatase
Sulfatase_C
Phosphodiest
SGSH_C
Motif
Other DBs
NCBI-GeneID:
108887657
NCBI-ProteinID:
XP_018538644
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Position
LG2:3924040..3942346
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AA seq
521 aa
AA seq
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MSALTFTLLSAIICCSVTEKPTNVSSPNIIIMLMDDMGWGDLGVFGQPSKETPNLDAMAA
QGMLLPNFYTANPLCSPSRAALLTGRLPVRNGFYTTNAHARNAYTPQEIVGGISKDEILL
PQMLKKKGYVSKIVGKWHLGHRPQYLPLENGFDEWFGAPNCHFGPYNSSIRPNIPVYNNS
EMLGRYYEEFKINRKTGESNLTEIYLMEGLDFILRQTKARRPFFLYWAPDATHAPVYASK
RFLGKSQRGRYGDAVMELDYSIGQILSWLQTLGIDNNTFVFFTSDNGAALISAPNEGGSN
GPFLCGKQTTFEGGMREPAIAWWPGHIKEGTVSFQLANVMDLFTTSLALAGVSPPNDRTL
DGLDLTPVLLNRSHTLQNRPIFYYRGNELMAVRLGQYKAHYWTWSNSWEEFKKGINFCPG
QEIPDVTTHEQKEHTMQPIIFHLGRDPGEKFPISVLSKEYHDVLSRISPVVEQHKKTLVP
GAPQLNMCDVAVMNWAPAGCEKLGKCLKVPKSEPWKCDWPH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctaacttttactcttcttagtgcaataatatgttgttctgtgacagagaag
ccaacaaatgtttcatctccaaacattatcatcatgctcatggatgatatgggttggggg
gacttaggggtgtttggccagccctctaaagagactcccaatctggacgccatggctgct
cagggcatgttgcttccaaacttctacactgccaaccccctctgttccccatccagagct
gcacttctcaccggcagactgcccgtcagaaacggtttctacaccaccaatgcccacgcc
agaaatgcatacacaccacaggagatagttggagggatctccaaggatgagattttgtta
ccccagatgctgaagaaaaagggatatgtcagcaagatagttggcaagtggcatctgggc
cacagaccacagtaccttcctctggagaatggttttgatgaatggtttggtgcaccaaac
tgccactttggcccatacaacagcagcatcagacccaacatccctgtctacaacaattct
gagatgcttggcagatactatgaggaatttaagattaacagaaagactggagagtccaac
ctcacagagatctatttgatggaaggtcttgacttcatactccgtcagactaaagcccga
cggcccttcttcctctactgggcacctgacgccactcatgcacctgtctacgcttccaaa
cgcttcctaggaaagagccaacgaggccggtatggagatgctgtgatggagctggactac
agcatcggtcaaatcttatcatggctgcagactctgggcattgacaataacacctttgtc
ttcttcacttcagacaacggagctgctctgatatctgccccaaatgaaggtggcagcaat
gggccattcctctgtgggaagcagaccacttttgaagggggcatgagggagcccgccatt
gcctggtggcctggacacatcaaagaaggcacggtgagcttccagttggccaatgtgatg
gatctgttcaccaccagcctggctctggctggcgtcagccctcctaatgaccgaacgttg
gatggactggacctcacaccagtcctgttaaaccgctcccacacactccaaaacaggcct
atcttctattaccgtgggaatgagctgatggctgtgaggcttggacaatacaaggcgcac
tactggacctggagcaactcatgggaggagtttaaaaaaggtatcaacttctgtccaggt
caggaaatcccagatgtgacgactcacgaacagaaagagcacacgatgcagccaatcatt
ttccacctgggacgggatcctggggaaaagtttccaatcagtgtgttgtctaaggagtac
catgatgtgctaagcaggatctctccagttgtggagcagcataaaaagactctggtgcct
ggtgctccccagctgaacatgtgtgacgtggcagtgatgaactgggcccctgcaggctgt
gagaagttaggaaagtgtctcaaagtgcccaagtctgagccctggaagtgcgactggcca
cactga
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