Lates calcarifer (barramundi perch): 108887693
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Entry
108887693 CDS
T04895
Symbol
calcrla
Name
(RefSeq) calcitonin gene-related peptide type 1 receptor
KO
K04577
calcitonin receptor-like
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108887693 (calcrla)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108887693 (calcrla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108887693 (calcrla)
G protein-coupled receptors [BR:
lcf04030
]
Secretin receptor family
Calcium-regulating peptide
Calcitonin
108887693 (calcrla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
HRM
Sec8_N
Motif
Other DBs
NCBI-GeneID:
108887693
NCBI-ProteinID:
XP_018538699
UniProt:
A0A4W6CZ06
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Position
LG1:8969930..8993190
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AA seq
478 aa
AA seq
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MAKRKMGSIGRSWMVGLVLLCNLTKFFVKASLEVNETQHQHPTNVYHDMGVTRNKIVTAQ
FECYQKIMKDNTNNRQEPMCNRTWDGWLCWDDTKAGIISEQHCPDYFQDFDPSEMVTKIC
TDSGHWFLHPESNRTWTNYTRCNEHTNEGRVTAMNLFYLALIGHGLSLTSLFISLGIFFH
FKSLSCQRITLHKNLFFSFVLNSVITIIWLTAVANNQELVQRNPTSCKVSQFIHLYLFGC
NYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYLLGWGFPLIPASIHAIARSYYYNDNCWIS
SKTSLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTHHAESSLYMKAVRATLILVPLL
GIQYVLLPYKPEGRVSSEIYDYIMHILMHYQGLLVATIFCFFNGEVQAVLRRHWNQYHIQ
FGSSVGNHSDALRSASYTASSITEVQGCYSIDSHTEHMNGKGCHDADASILKSDSPFA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaggaagatgggcagcattgggcggagctggatggtgggactcgtactgctg
tgtaatctgacaaagtttttcgtcaaagcaagtctggaggtcaatgaaacgcagcaccag
catccaaccaatgtctaccatgacatgggagtgaccaggaacaagatagtaactgcacag
ttcgagtgctatcaaaagataatgaaggataataccaacaacagacaagagcccatgtgt
aatcgcacgtgggatggctggctgtgttgggacgacactaaggcaggaattatctcagag
cagcactgtccggactacttccaggatttcgatccctcagagatggtgacaaagatctgc
actgacagcggtcactggttcctgcatcctgagagcaaccgaacatggacaaactacact
cgctgcaatgaacacaccaatgaaggcagagtgactgcaatgaatcttttctacttagcc
ctcataggacacggactgtcactgacctccctcttcatctcccttggaatattcttccac
ttcaagagtttaagttgccaaaggatcacccttcacaaaaacctcttcttttctttcgtt
ctgaactctgtgatcaccatcatttggttgacagcagtggcaaacaaccaggagctggtg
cagaggaatccaacgagctgtaaagtgtcccagttcattcatctgtacctgttcggctgc
aattacttctggatgctgtgtgaggggatatacctgcacactctcatcgtggtggccgtg
tttgctgagaaacaacacctcatgtggtactatcttctaggctggggctttcctctcatt
ccagcctccatacatgccattgctcgaagttactactacaacgacaactgttggattagc
tccaaaacatcgctgctctacatcatccacggtcccatctgtgctgctcttttggtcaat
ctgttctttctcctgaacattgtgcgagtgctcatcaccaaactgaaggtgacccatcac
gcggagtcgagtctctacatgaaagctgtgagagccaccctgatcctggtgcctcttctg
ggaatccagtatgtcctgcttccctacaagccagagggacgggtgtcctctgaaatatac
gactacatcatgcacatactaatgcattatcagggtctgctggtggccaccatcttctgc
tttttcaacggagaagtccaggcggttctgaggaggcactggaaccagtaccatatccag
tttggcagcagcgtaggaaaccactcagacgccctgcgctcggcctcctacacggcctcc
tccatcacagaggttcagggctgctacagcatcgacagccacacagaacacatgaacggc
aagggctgccacgacgcagacgcctccatcttaaagtcagacagccccttcgcctga
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