Lates calcarifer (barramundi perch): 108887713
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Entry
108887713 CDS
T04895
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108887713
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
108887713
NCBI-ProteinID:
XP_018538735
UniProt:
A0A4W6EBN4
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Position
LG2:221444..230138
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AA seq
841 aa
AA seq
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MKPAQERNQECLPPKKRDLPISNSGGAGGTGGGGAAGGGVGSGGGGSGGVGGGGGVGEDE
VVSIQNSAANSETQGGAPSAEWLRAQPGLHYGVENSDGLPAVPVDQYSMLYKVALPSVTY
SPTSLHPVLSHISPAYTVHSPLLQHPGLPYPPLGYAQIPHSSLQFVSSPYAAVPYALTPG
FVPGSLISPSGTIPQPHLVPYPSVIQEGVVSPPPQAQVAAHTFAKVAASGGVPLMLPSEQ
AAQQHLGTVGVLPAAELSSRGIPVFYHPQGARAAAATRDPHSTHQESEPEMNGGDKEQGA
REAGADSTYAHRNARVPATASGSAPQEHSQDRGLHNRRLEERSSPGQRSTPDSDLEVQQV
VGRLVSSSQGGSGVRKEVSFAPLNLSQGAQRARDSHGESVGVISSRAAYAAQPATYSDPR
VSGLQQQTGQPGHAVVLANGQPVLIPLEYHPQHQPQAPQQHYPGQANDAPASHGSSITAS
ITSSFKASDSSARLCLPERAEPATAQQQLPQHPPVQPAAETTQAVASSLAPAPTPCNPSH
FMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSMVVDIRASQQRPGLVSLHFT
VGEQQSKVTIDVPPEHPFFVFGQGWSSCSPERTAQLYGLACHHLQVGDVCVSITLQQQLQ
PQQQKQAQHHHPQQQQSLNLNLPRTLSKTNATSGPGHQLMGPPAPQQSRPPSHFRIDRLH
RERQRDGEKDALDKEEAAHVGAAGHAESPIRPSRTSAEHPRSQSSYHLHTEGSAFAGAGM
GAMHAALGASQRRWSSPGLQRYSMKGDEGPRPQISSSSHSRPSFIPQEVKLSIEGRSNAG
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagctcaggagcgcaaccaggagtgcctgccccccaagaagagggacctcccg
atcagtaacagcggtggagctggagggacggggggaggtggggccgcggggggaggtgta
ggcagcggaggaggaggcagtggcggtgttggaggtggaggtggtgttggagaagatgag
gtggtttccatccagaactctgcagccaacagtgagactcagggaggggccccgtctgca
gagtggctgcgagctcagccaggacttcattatggggtggagaactctgacggcctccct
gcagtgcccgtcgaccagtacagcatgctctacaaagtggctcttccatctgtcacctac
tcccccaccagtctccacccagtgttaagccacatctctccagcctacaccgttcactct
cctctcctgcagcacccaggccttccctaccctcctctgggctacgctcagatccctcat
tcctccctgcagtttgttagctccccatacgcagccgtaccctacgctctgactcctggc
tttgtcccgggatccttaatctctccctcaggcaccatccctcagccccacctcgttccc
tatccgtctgtcatacaggagggtgtggtttccccacctccccaggcccaggtagctgct
cacacctttgccaaagtcgcagcgtccggcggcgtcccgctgatgctgccctcggagcag
gctgcccagcagcacctcggcactgtgggagttctgcccgcagcagagctcagctctcga
ggaataccggtcttctaccaccctcagggcgccagggctgctgctgccaccagagatccc
cacagcacccatcaggagagtgagccggagatgaacggaggggataaagagcagggagcc
agagaggccggagcagactcgacctacgctcacaggaacgcacgtgtcccggcaacagcg
tcaggctctgcacctcaggagcacagccaggacagaggcctgcacaaccgcaggctggag
gagaggagctcacctgggcagcgcagcactccagacagcgacctggaggtgcagcaggta
gtcggtcgtctggtttcctccagccaaggaggcagtggagttcgtaaagaggtctccttc
gcccccctgaacctctctcagggtgcccagagagccagagattcccatggagagagcgtg
ggagtgatttcctcccgggcggcgtacgcggcgcagcctgcgacctacagtgaccccagg
gtgagtggcctccagcagcagacaggacaaccgggccatgctgtcgtgctcgccaacgga
cagccagtcctgattcctctggagtatcaccctcagcatcagccccaggcgccgcagcaa
cactacccgggacaggctaacgatgccccagctagccacggctcctccatcacggcctcc
atcacctccagctttaaagcctctgattcttcagccagactgtgcctccctgagagggcg
gagccggccacagcccagcagcaacttcctcagcatcctcctgtccagcctgcggcagag
acaactcaggccgtggcctccagcctcgctcccgccccgaccccctgcaacccgtctcac
ttcatgaagggggccatcatccagctggctacgggggagctgaagcgcgtggaggacctg
cagactcaggactttgtgcggagtgccgaggtgagcggggggctgaagatcgactccagc
atggtggttgacatccgagccagccagcagagaccggggctggtgtcacttcacttcacc
gtgggcgagcagcagagcaaagtgaccatcgacgtgcccccggagcaccccttcttcgtg
ttcgggcagggctggtcgtcctgcagccccgagcgcacggcccagctctacggcctggcc
tgccatcacctgcaggtgggagacgtgtgtgtgtccatcaccctgcagcagcagctgcag
ccacagcagcagaaacaagcgcagcaccatcacccacagcagcagcagagcctgaacctg
aacctgcccaggactttgagcaaaaccaacgccacgtcaggacctgggcaccagctaatg
gggcctcccgccccccagcagtcacggcctccgtctcacttcaggatagatcggctccac
agagagagacagagggacggggagaaagacgcgctggataaggaggaagcagcacacgtg
ggggcggcgggccacgcagagtcgcccatcagaccgagcaggacctcggccgagcacccg
cggagtcagagcagttaccacctgcacacagagggctctgccttcgcgggggcggggatg
ggagccatgcatgcggcgctgggagcctctcagaggcgctggtcctcacccggcctccaa
agatacagcatgaagggagacgaggggccgcgtcctcagatcagctcctccagccacagc
aggccctccttcatcccccaggaggtcaaactgtccatcgaggggcgctctaacgcaggg
aagtag
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