Lates calcarifer (barramundi perch): 108887756
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Entry
108887756 CDS
T04895
Name
(RefSeq) lymphocyte-specific protein 1
KO
K12327
caldesmon
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
108887756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108887756
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108887756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
108887756
NCBI-ProteinID:
XP_018538788
UniProt:
A0A4W6EJB1
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Position
LG2:complement(12260880..12287353)
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AA seq
539 aa
AA seq
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MSESIRRRSSSRQLLQNLIRVTAQRSQEDAEEVERERRRRAREKQRGEESPSWPEPPHHN
ELTHNTELDKEELKPSCCLVLEEDEGFSDWSHRLEVLQDDCRAREQTRSTPQWKPGHEEK
KKQEDGEEEEEGQEPARSSQAQEASTRPPEKISSSKKEVRTSYSSSVFVPQDTRLQYATG
QPADRTSYLAAGTMKPRGGACRVDGEREQEEPKEEEEQVQPTLQREWRSTETRQSPEDED
NLEKEEVLSFTHEMREDLHLRREQKHREEEEEEEEDEEKEHKTPDKRSVETRDRRSEEVN
TRSAASLCSSSSSEGEEPLNCYGPMSPTFKKLLIQFYPDEVNSRVSTDGKCTIIERTESL
RKSTNMRKTLPPGAVSKIDRKLKQYTHALEVSSKDGRSSGGHTLTDLTSPTEPIASKKNL
FEAGEAWNQNAISVTASKDADSVKVGVADLINQWVRGGEDGSRCSSPSKPAEIKPGGVLN
KKNLWESLGDTLASGKDGKESSPGKRYKFVVTGHGKYEKVSVDTEDVNCQSAGQPYDDL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccatcagaagaagaagctccagcagacagctcctgcagaacctcatcagg
gtgacggcccagcggagccaggaggacgccgaagaggtagaacgggagcgaaggaggaga
gccagggagaagcagagaggagaggagagcccctcctggccagagcccccccatcacaac
gagctgacacacaacacggaattggacaaagaggagctgaagcccagctgctgcctggtt
ctggaggaggatgagggcttcagtgactggagtcacaggttggaggtgctgcaggatgac
tgcagggccagggagcagacacgttcaacaccacagtggaaaccagggcatgaagagaag
aaaaagcaggaggatggagaagaggaggaagagggacaggagccagcaagaagcagtcag
gcccaagaagcttcaacgagacctccagagaagatatccagcagcaaaaaggaagtcagg
acgtcatatagctcgtcagtgtttgtgccacaggacaccagactgcagtacgccacagga
caaccagcagacaggacatcctacctggcggcagggacaatgaagccacgtggaggggcc
tgtagagtggatggggagagggagcaggaagagccaaaggaagaggaagaacaggtgcag
cccactttgcagagagagtggaggtcaacagaaacccgacaaagccctgaagatgaagac
aatctggagaaggaagaggtactgagcttcacacatgaaatgagggaggacctccatctc
aggagggagcagaaacacagggaggaggaggaagaagaggaggaagatgaggagaaagag
cacaagacaccagacaagagatcagtggagacgagagacagaaggagtgaggaggtgaac
acaagatctgcagcttctctctgcagcagcagcagcagcgaaggcgaggagccattaaac
tgctacggtcccatgagcccaacattcaagaaactcctcatacagttttatccagatgaa
gtcaacagcagagtctcaacagatggtaaatgcacgatcatagagagaactgagtctctg
aggaaaagcaccaacatgaggaaaacactgcctcctggtgctgtttccaagattgacagg
aaactgaagcagtacacacatgcactcgaggtctcatcaaaggatggcagatcatcaggc
ggtcatacgctgacagacctcacgagtcccactgaacctattgcctccaagaagaatctg
tttgaggccggagaagcttggaaccaaaacgccatctcagtcacagcatctaaggatgca
gacagtgtaaaagtcggcgtggctgatctcatcaatcagtgggtgagaggaggtgaagat
ggcagcaggtgcagctcgccctccaaaccagcagaaataaaacctggcggtgttttaaac
aagaaaaatttatgggagagtcttggtgacacattagcctctggaaaagatgggaaggaa
agctcccctggtaaaaggtataaatttgtggtgacgggtcacggaaagtatgagaaggtt
tctgttgacactgaagacgtgaactgtcagtcagctggacaaccctatgacgatttgtga
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