KEGG   Lates calcarifer (barramundi perch): 108887756
Entry
108887756         CDS       T04895                                 
Name
(RefSeq) lymphocyte-specific protein 1
  KO
K12327  caldesmon
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    108887756
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108887756
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     108887756
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 108887756
NCBI-ProteinID: XP_018538788
UniProt: A0A4W6EJB1
LinkDB
Position
LG2:complement(12260880..12287353)
AA seq 539 aa
MSESIRRRSSSRQLLQNLIRVTAQRSQEDAEEVERERRRRAREKQRGEESPSWPEPPHHN
ELTHNTELDKEELKPSCCLVLEEDEGFSDWSHRLEVLQDDCRAREQTRSTPQWKPGHEEK
KKQEDGEEEEEGQEPARSSQAQEASTRPPEKISSSKKEVRTSYSSSVFVPQDTRLQYATG
QPADRTSYLAAGTMKPRGGACRVDGEREQEEPKEEEEQVQPTLQREWRSTETRQSPEDED
NLEKEEVLSFTHEMREDLHLRREQKHREEEEEEEEDEEKEHKTPDKRSVETRDRRSEEVN
TRSAASLCSSSSSEGEEPLNCYGPMSPTFKKLLIQFYPDEVNSRVSTDGKCTIIERTESL
RKSTNMRKTLPPGAVSKIDRKLKQYTHALEVSSKDGRSSGGHTLTDLTSPTEPIASKKNL
FEAGEAWNQNAISVTASKDADSVKVGVADLINQWVRGGEDGSRCSSPSKPAEIKPGGVLN
KKNLWESLGDTLASGKDGKESSPGKRYKFVVTGHGKYEKVSVDTEDVNCQSAGQPYDDL
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgtcagagtccatcagaagaagaagctccagcagacagctcctgcagaacctcatcagg
gtgacggcccagcggagccaggaggacgccgaagaggtagaacgggagcgaaggaggaga
gccagggagaagcagagaggagaggagagcccctcctggccagagcccccccatcacaac
gagctgacacacaacacggaattggacaaagaggagctgaagcccagctgctgcctggtt
ctggaggaggatgagggcttcagtgactggagtcacaggttggaggtgctgcaggatgac
tgcagggccagggagcagacacgttcaacaccacagtggaaaccagggcatgaagagaag
aaaaagcaggaggatggagaagaggaggaagagggacaggagccagcaagaagcagtcag
gcccaagaagcttcaacgagacctccagagaagatatccagcagcaaaaaggaagtcagg
acgtcatatagctcgtcagtgtttgtgccacaggacaccagactgcagtacgccacagga
caaccagcagacaggacatcctacctggcggcagggacaatgaagccacgtggaggggcc
tgtagagtggatggggagagggagcaggaagagccaaaggaagaggaagaacaggtgcag
cccactttgcagagagagtggaggtcaacagaaacccgacaaagccctgaagatgaagac
aatctggagaaggaagaggtactgagcttcacacatgaaatgagggaggacctccatctc
aggagggagcagaaacacagggaggaggaggaagaagaggaggaagatgaggagaaagag
cacaagacaccagacaagagatcagtggagacgagagacagaaggagtgaggaggtgaac
acaagatctgcagcttctctctgcagcagcagcagcagcgaaggcgaggagccattaaac
tgctacggtcccatgagcccaacattcaagaaactcctcatacagttttatccagatgaa
gtcaacagcagagtctcaacagatggtaaatgcacgatcatagagagaactgagtctctg
aggaaaagcaccaacatgaggaaaacactgcctcctggtgctgtttccaagattgacagg
aaactgaagcagtacacacatgcactcgaggtctcatcaaaggatggcagatcatcaggc
ggtcatacgctgacagacctcacgagtcccactgaacctattgcctccaagaagaatctg
tttgaggccggagaagcttggaaccaaaacgccatctcagtcacagcatctaaggatgca
gacagtgtaaaagtcggcgtggctgatctcatcaatcagtgggtgagaggaggtgaagat
ggcagcaggtgcagctcgccctccaaaccagcagaaataaaacctggcggtgttttaaac
aagaaaaatttatgggagagtcttggtgacacattagcctctggaaaagatgggaaggaa
agctcccctggtaaaaggtataaatttgtggtgacgggtcacggaaagtatgagaaggtt
tctgttgacactgaagacgtgaactgtcagtcagctggacaaccctatgacgatttgtga

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