Lates calcarifer (barramundi perch): 108887759
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Entry
108887759 CDS
T04895
Symbol
aph1b
Name
(RefSeq) gamma-secretase subunit Aph-1b
KO
K06172
gamma-secretase subunit APH-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
lcf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108887759 (aph1b)
09133 Signaling molecules and interaction
04519 Cadherin signaling
108887759 (aph1b)
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Motif
Pfam:
Aph-1
YqfD
MRX12_C
Motif
Other DBs
NCBI-GeneID:
108887759
NCBI-ProteinID:
XP_018538800
UniProt:
A0A4W6EI68
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Position
LG2:12154401..12159832
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AA seq
258 aa
AA seq
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MTASVFFGCTFIAFGPAIALFLFTIAREPLRVIFLIAGAFFWLVSLLLSSLVWFISVQIS
NKESAVQQKGLLIFGVVLSVLLQETFRFAYYKLLKKANEGLLALSQEETMPISIRQLAYV
SGLGFGFMSGAFSVVNILADSVGPGTVGIHGDSQHYFLSSAFMTMAIILLHMFWGVVFFD
ACEKQRWWAVAAVIISHLVVSCLTFQNPEYVTSLVPTYVILFLMGIWAFYTAGGSFRNLK
LCLTCKDKDFLLANHRPR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtcggtgtttttcggctgtaccttcatcgccttcgggccggccatcgctctg
ttcctgtttaccatcgcccgggagccgctgagggtcattttcctcatagcaggagcgttt
ttctggctggtgtctctgctgctgtcgtctctggtgtggttcatctcggttcagatcagt
aataaggagagtgcggtgcagcagaagggtctgctcatcttcggtgtggtgctgtctgtc
ctacttcaggaaaccttccgcttcgcttactacaagctgctgaagaaagcgaatgaagga
ctcctcgctctcagtcaggaggaaaccatgcccatctccatacggcagctggcctacgtg
tctggccttggctttggcttcatgagtggagcgttctctgtggtgaacatcctggctgac
tctgtgggacctgggactgtcgggatccacggagactcacagcactacttcctgtcctcg
gccttcatgaccatggccatcatcctccttcacatgttctggggcgtcgtcttcttcgac
gcctgtgagaagcagcgctggtgggcggtggctgctgtcatcatcagtcaccttgtggtg
tcctgtctgacctttcagaacccagagtatgtcaccagcctcgttcccacctacgtcatc
ttgttcctgatgggcatctgggcgttttacacggcgggcggctcgtttaggaacctcaag
ctctgcctgacctgcaaagacaaggacttcctgctcgccaaccaccgacccagataa
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