KEGG   Lates calcarifer (barramundi perch): 108887759
Entry
108887759         CDS       T04895                                 
Symbol
aph1b
Name
(RefSeq) gamma-secretase subunit Aph-1b
  KO
K06172  gamma-secretase subunit APH-1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04330  Notch signaling pathway
lcf04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108887759 (aph1b)
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    108887759 (aph1b)
SSDB
Motif
Pfam: Aph-1 YqfD MRX12_C
Other DBs
NCBI-GeneID: 108887759
NCBI-ProteinID: XP_018538800
UniProt: A0A4W6EI68
LinkDB
Position
LG2:12154401..12159832
AA seq 258 aa
MTASVFFGCTFIAFGPAIALFLFTIAREPLRVIFLIAGAFFWLVSLLLSSLVWFISVQIS
NKESAVQQKGLLIFGVVLSVLLQETFRFAYYKLLKKANEGLLALSQEETMPISIRQLAYV
SGLGFGFMSGAFSVVNILADSVGPGTVGIHGDSQHYFLSSAFMTMAIILLHMFWGVVFFD
ACEKQRWWAVAAVIISHLVVSCLTFQNPEYVTSLVPTYVILFLMGIWAFYTAGGSFRNLK
LCLTCKDKDFLLANHRPR
NT seq 777 nt   +upstreamnt  +downstreamnt
atgacggcgtcggtgtttttcggctgtaccttcatcgccttcgggccggccatcgctctg
ttcctgtttaccatcgcccgggagccgctgagggtcattttcctcatagcaggagcgttt
ttctggctggtgtctctgctgctgtcgtctctggtgtggttcatctcggttcagatcagt
aataaggagagtgcggtgcagcagaagggtctgctcatcttcggtgtggtgctgtctgtc
ctacttcaggaaaccttccgcttcgcttactacaagctgctgaagaaagcgaatgaagga
ctcctcgctctcagtcaggaggaaaccatgcccatctccatacggcagctggcctacgtg
tctggccttggctttggcttcatgagtggagcgttctctgtggtgaacatcctggctgac
tctgtgggacctgggactgtcgggatccacggagactcacagcactacttcctgtcctcg
gccttcatgaccatggccatcatcctccttcacatgttctggggcgtcgtcttcttcgac
gcctgtgagaagcagcgctggtgggcggtggctgctgtcatcatcagtcaccttgtggtg
tcctgtctgacctttcagaacccagagtatgtcaccagcctcgttcccacctacgtcatc
ttgttcctgatgggcatctgggcgttttacacggcgggcggctcgtttaggaacctcaag
ctctgcctgacctgcaaagacaaggacttcctgctcgccaaccaccgacccagataa

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