Lates calcarifer (barramundi perch): 108887782
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Entry
108887782 CDS
T04895
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108887782
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108887782
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108887782
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108887782
NCBI-ProteinID:
XP_018538834
UniProt:
A0AAJ7PU87
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Position
LG2:complement(11318604..11343247)
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AA seq
786 aa
AA seq
DB search
MFQDFSDQRDMAKQPASASAPTGYIPGQQPDGAAGLTANKPDNTAACPPPAPHHHPAPQP
PPPCNESKTFCPTENKPGEPDTNKAYGTFKSTPPPVPGSVAVNSAFRKDSAGSARGGSAQ
YGDPLRATAEQNNTAGNWTAMSQTTIILGTDGNTSVQPGTLAGADDDDEGGDENKARGNW
SNKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLTMLGIAGIPIFLLEVSLGQF
ASQGPVSVWKCIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCRNE
WNTVECKDKDMLLLDSCILRDRNITSIKNSTFCLSANAVGNLSKLLNMTVDGNKTYVSPS
EEYFKYNVLHISKGIEYPGDIRWPLAGCLFLAWLIVYASLAKGIKSSGKVVYFTATFPYV
VLIILLIRGVTLPGAGDGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSY
NKFHNNCYRDTIIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIEQVADEGPGIAFVVYP
EALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRKHKPLFTLVCCV
SFFILGFPMITESGMYMLQLVDTFAASYSLVIIAIFELVGISYLYGLQRFCEDIEMMIGF
QPNRFWRLCWAFVTPTILTGILGLSLYQWKVMTYEDYTYPTWSMVLGWLMVICSVIWIPI
MFVIKMHLAPGTIIERLKLVCSPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLKLPPKDF
QLGSYQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggatttctctgaccagagagacatggccaaacaaccggccagcgccagcgca
cctaccggctacatcccggggcagcagcccgacggagctgcgggacttacagcaaacaaa
ccggacaacactgctgcgtgcccgccgcccgcccctcaccatcacccggcgcctcagccg
ccgcctccatgcaacgagagcaaaactttttgtcccacggaaaataaacccggagaaccg
gacaccaataaagcgtatgggacgtttaaaagcaccccgccgccggtccctggatccgtg
gccgtcaactcggccttcaggaaggattccgccggttcggcccgcggggggtccgcccag
tacggcgacccgctgcgggccaccgcagagcagaacaacaccgcgggcaactggacggct
atgagccagaccaccatcatactgggaacagatgggaacacgtctgttcagcctggcacc
ttggcgggggctgacgatgatgacgaggggggagatgagaataaggccagaggaaactgg
tccaataaactggattttattctgtccatggttggctatgcggtgggactggggaacgtg
tggaggttcccttatcttgccttccaaaatggtggaggagcttttctgatcccctacctg
acaatgttgggcattgccgggatcccaatctttttgctggaggtttccctgggccagttt
gccagccagggccccgtgtcagtgtggaaatgcatcccagctctacaaggttgcgggatt
gccatgttgataatatctgtcttgatagccatatactataatattattatgtgctggaca
ctgtactacctgttcgcttcgttgaagggctcactgccatgggctaactgtaggaatgag
tggaacacggtggaatgtaaggacaaagacatgctgctcttagactcgtgcatcctgcgg
gacagaaacatcacctccatcaagaactccactttctgtctgtccgcaaacgctgtggga
aacctgagcaaactgttaaacatgactgtggatggcaacaagacctacgtcagccccagt
gaggagtacttcaagtacaatgtgctgcacatctctaaagggattgagtatccaggagac
atccgctggcctctggcaggttgtctcttcttggcctggcttatcgtctacgcttcttta
gctaaaggaatcaagtcatcagggaaggtggtttatttcacagccacatttccctatgtg
gtgctgatcatcctcctgatcagaggagtgaccctccccggtgccggcgacggcatcctc
tatttcatcacaccaaaatgggagaaactcaatgacgccaaggtgtggaaagatgcagcc
actcagatcttcttctctctgtcggctgcttggggaggcctcatcactctctcttcttac
aataagttccacaataactgctacagggacactattattgtgacatgtacaaacagtgcc
accagtatatttgctgggtttgtcatcttctcagtcattggttttatggcgcatgagctg
aaggtgcccatagagcaggttgcagatgaaggtccaggcatagcgttcgtggtgtatcca
gaggctctgaccagacttcccctgtctccattctgggcgatcatcttcttcctcatgctc
ctgacccttggcctggataccatgtttgccaccattgagaccatcgtaacctctgtgtca
gacgagttccccaaatacttgaggaaacacaaaccgctcttcaccctggtctgctgtgtc
tccttcttcatcttgggatttcccatgatcacagagagtgggatgtacatgctgcagctg
gtggacacattcgcagcctcttactctttggtcatcattgccatcttcgagctggtgggg
atctcctacctctatggcctgcagaggttttgcgaggacattgaaatgatgattggtttc
cagccaaaccgattctggagactctgctgggcctttgtgactccaactattttgacgggc
atcctgggactgagtctgtaccagtggaaggtgatgacctacgaggactacacctacccc
acctggtccatggttctgggctggctcatggtaatctgctctgtcatctggatccccatc
atgttcgtcattaagatgcacctcgcccccggcactataattgagcgtctgaagctggtc
tgctcccctcagcccgactggggtcctttcctgatgaagcaccgcggagaacgctacaag
aatatgattgaccctctgggaaccaactccctgggcctcaaactgcccccaaaggacttc
cagcttggctcctaccagtag
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