Lates calcarifer (barramundi perch): 108887792
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Entry
108887792 CDS
T04895
Symbol
chst1
Name
(RefSeq) carbohydrate sulfotransferase 1
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
108887792 (chst1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108887792 (chst1)
Enzymes [BR:
lcf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
108887792 (chst1)
Glycosyltransferases [BR:
lcf01003
]
Unclassified
Sulfotransferases
108887792 (chst1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
108887792
NCBI-ProteinID:
XP_018538855
UniProt:
A0A4W6EJA9
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Position
LG2:10620397..10634120
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AA seq
428 aa
AA seq
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MQCSWKAVILLALASIAIQYTAIRTLTSKPFQLCPLPSPQNCGLGGQETEPPFERGAAGG
GGCDDYPYFSINATRKTHILVLATTRSGSSFVGQLLNQHQEVFYLFEPLYHVQTTLIPRL
SHSRNAADRRVMLGASRDLLRSLYGCDLYFLESYIKPTPTNHTTDKLFRRGASRALCQQP
VCDAFGPTDVNVEEGDCVKKCAALNMTLATEACREKRHVAIKIVRVPEIGDLRALVEDPR
LNIKVIQLVRDPRGILSSRIETFRDTYRLWRIWRATGRRPYNLDLSQLTVVCEDFLSSVS
TGLSHPYWLKGKYMLVRYEDLARNPLLKTKEIYDYLGLPMDKNVEDWIHANTRGSNETSA
KHKFGTVRDSAANAESWRLKLSYDMVEYTQTVCQKVLHQLGYKAVKSVEELKNMSLSLVQ
DKTFLPFL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgttcctggaaggcagtgattctgctggccttggcctccattgccatccagtac
acggccatccggacactcacctccaagcctttccagctgtgcccattgcccagcccccag
aactgtggtctggggggccaagagacagaacctccctttgagcggggagcagcaggcggc
ggaggctgcgatgactacccttacttttccatcaatgccacacgcaaaacgcatatcctg
gtcctggccaccacccgtagtggttcttcctttgttggccagctgctcaaccagcaccag
gaggtattctacttgtttgagcctctttatcatgttcagaccacactgattccacgtctg
tcacacagccgcaatgctgcagaccggcgtgtgatgctgggggccagtcgagacctcctg
cgcagcctgtacggttgcgacctgtatttcctggagagctatatcaaaccgacacccaca
aaccacaccacagataaactgttccgtcgtggtgccagccgagcattgtgccagcagcct
gtgtgtgatgccttcggtcctactgatgtaaatgtggaggaaggggactgtgttaagaaa
tgtgcggctttaaacatgaccttagccaccgaggcatgccgtgagaagcggcacgtggca
atcaaaattgttcgcgtgccagagattggagatctacgcgcattggttgaagacccacgg
ctgaatattaaagtgattcaactcgtcagagacccgcgtggtatcctgtcatcacggatt
gagacattcagggatacgtatcgtctgtggcgtatttggagagccacaggcagaaggccc
tataatctagacttgagtcagcttacagttgtctgtgaagactttctcagttctgtttca
actggtctcagccatccctattggcttaaagggaaatacatgttggttcgctatgaggat
ttggctagaaatccgcttctcaagacaaaggagatctatgactatctggggctgcctatg
gataaaaacgtggaagactggatacatgcaaacactcggggcagcaatgagacctcagca
aaacacaagtttggtacagtgagggattcagcagctaatgcagagagttggcgtttgaaa
ctgtcttatgacatggtagaatacacacagactgtgtgtcaaaaagtacttcaccagctg
ggatacaaggctgtgaaatcagtagaggaactgaaaaatatgtccctctcactggtacag
gacaaaacttttttaccttttttgtaa
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