Lates calcarifer (barramundi perch): 108887801
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Entry
108887801 CDS
T04895
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108887801
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
108887801
NCBI-ProteinID:
XP_018538871
UniProt:
A0A4W6EPU7
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All DBs
Position
LG2:complement(10358633..10396639)
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AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLSVIKPSSF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPAVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGEDSQTPLPPFGWVS
SSTTKGTPVSTRTTERTYTIPVIDQDVEGGLNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
PPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctctttgtgctgcttttggcccttcagatcctggtggtggct
gggctggttcgtgctcagacttgtccttctgtctgctcatgcagtaaccagttcagcaaa
gtcatatgcacccgtcgcagtctacgggatgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaggtggacagttttaaacatctg
cgccatctggagatcctgcagctgagcaagaatcacattcgcagcattgaaattggcgcc
ttcaatgggctggccagtctcaacaccttggagctctttgataatcggctcacgacaatc
cccaatggagcatttgagtacttgtccaagctgaaggagttgtggctacggaacaacccc
atcgaaagtataccatcttatgccttcaatcgggtcccctcgcttcgaaggctagatcta
ggtgagctcaaacgtctctcctacatttctgacggagccttcaaggatttgagcaacctg
cgctacctgaacctgggaatgtgcaacctcaaggagattcccaacatcttacctttggtc
aggcttgaagagctagaaatgtcaggaaaccagctctctgttatcaagcccagctcattt
acaggattagtgaaccttcagaagctgtggatgatgcatgctcagatccaaactattgag
aggaattcctttgatgaccttcagtcactggtggagctcaacctggctcacaacaacctt
acctttctaccacatgacctcttcacaccattgcatcgcctggagcgggtccacctccat
cacaacccttggaactgcaattgtgatatcttgtggctcagctggtggctaaaggaaaca
gtacctgccaatactagctgctgtgcccgctgccatactcctgcagttttcaaaggccgc
tacattggagaacttgaccacagctacttccagtgtgatgttcctgtcattgtggagcca
cctagtgacttgaatgtgacagaaggcatgggtgcagagcttaaatgccgtacaagctcg
ttgacatccatcagctggcttacaccaaatggctcattggtgacacatggggcttacaag
gtacgtttgtctgtactcaatgacgggacactgaattttactagtgtcacaatgcaggac
actgggacttacacctgtatggttagcaacacagcgggcaacatttctgcctctgctgtg
cttaatgtcacttctgtggaaaacagcggggtgacctattttaccacagtcaccgtggag
accattgagactccgggggaagatagccaaacgccacttcccccatttggctgggtgtca
tcttcaacaacaaaaggtacccctgtttcaacgcggaccacagagcggacttacaccatt
ccagttattgatcaggatgtggaaggaggcctcaatggcctagatgaagtgatgaaaaca
accaagattattatcggctgcttcgtggccatcacacttatggctgctgtcttgctggtt
attttctacaagatgaggaagcagcataaccagcaggatcccgatggcccagcctcctct
atggaggtcattactgttgaagaagagcttgcaggtgttgctgccatggagagacaccta
tcgttgccccctctggagcactacaaccactacaacacctacaagagcacttaccaccac
cctcctatgctcagtaccatacacagctcagccacacaggaacctttattgattcaagcc
tgctcaaaagacaatgtacaagagacccaaatctaa
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