Lates calcarifer (barramundi perch): 108887809
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Entry
108887809 CDS
T04895
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108887809 (lingo1b)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108887809 (lingo1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRR_RPS2
Ig_C17orf99
LRR_LRWD1
LRRNT
V-set
C2-set_2
Ig_5
Zn_ribbon_TFIIS
Motif
Other DBs
NCBI-GeneID:
108887809
NCBI-ProteinID:
XP_018538885
UniProt:
A0A4W6ENV6
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All DBs
Position
LG2:10145254..10162593
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AA seq
623 aa
AA seq
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MTVLVRSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNAQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKILGPEEFINYPQLEELQMNENAISTIEPGAFSNLM
NLRTLGLRSNELKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNLASVPTDALSHLHNLLSLRLRYLNVTVIRDYSFKRLY
RLRVLEISHMPALDTMTPKCLFGLNLTSLSITNCNLTVIPYQAISHLRYLRFLNLSFNPI
HTVEGNQLFNLQKLQAFHLAGGRLVAIEPYSFRGLNHLRVLNVSSNSLSTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCTSPEVVQGKEFKDFPDILPSDYF
ICQKSKIMDYKVQESHVDEGTTVYFTCQAEGDPAPVIMWLSPKKEYITTKTVGSRLSVSN
EGTLEVRYAQIQDNGTYMCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEETEEASPTEAPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagaagtaggatggtgtctggggaggcaggggggcacagctacttg
gtggcgtgctggcagcccatcctgatcctgatgctgggcaccgtcctttctggctccacc
accggttgcccctcccgatgtgactgcaatgctcaggagcgttcagttgtgtgccatcga
cggagactggcagctcttcctgaaggcatccccactgagacaaggctgctagacctcagc
aagaaccgtctgaaaattctggggcctgaagagttcattaattaccctcagctggaggag
ctgcaaatgaatgaaaacgcaatctcaaccattgagcctggggcttttagcaaccttatg
aaccttcggactctaggtttgcgcagcaacgagctgaagctcatccagctaggggtcttc
actggcctgaccaacctcactcagctggatattagtgagaacaaaattgtcattctgctc
gactatatgttccaggagctgtacaacctgagggctttggaggttggtgacaatgaccta
gtattcatctcaccccgatcatttcatggcctcagcaaccttgaaagcctaaacattgag
ggatgcaatctggcctcagtgcccactgatgcccttagccatctgcataacctgttgtca
ctccgattacgttatctcaatgtaactgtcataagggattactcctttaagaggctgtat
cggctcagagtgctggagatttctcatatgcctgccctggataccatgaccccaaaatgt
ttgtttggactcaacctcacatcactgtccatcacaaactgtaatctcaccgtcatcccc
taccaagccatcagtcacctaagatatctccggtttttgaatctgtcattcaatccaatt
catacggtggaagggaaccaactgttcaatctacagaagctccaggcttttcatttggct
ggtggaagattagttgccattgagccctactccttccgaggactcaaccacctccgtgta
ctcaatgtatccagcaacagcttgagcaccctggaggagtctgtctttcactcagtggga
aacctggagaccctggctttatacgacaacccactggcctgtgactgtcgcttgctctgg
gtctttcgccgccggtggaggctcaacttcaacagacagcagcccatgtgcacttcacct
gaggttgtgcaagggaaagaattcaaggacttcccagacatcctcccttctgactatttc
atctgccagaaatcaaagatcatggattataaagttcaagaaagccatgtggatgaagga
actacggtctatttcacttgccaagctgagggtgatccagccccagtgataatgtggcta
tcccctaagaaggaatacatcactaccaaaactgtggggtctagactttctgtgtctaat
gaaggcacattggaggtgcgttatgcccaaatccaggacaacggcacatacatgtgcatt
gcaagcaatgcagcaggcaatgacaccaaagctgctcacctttttgtgcatagctactcc
cccaattggccccaccagccaaacaaaacatttgccttcatttccaaccagcccagcgat
gaaggtgctaatgtgactcgggccacagttccatttccatttgatgtaaagacactcatc
attgcaaccaccatgggatttatctctttcctcggagttgtcctcttctgtcttgtgata
ttattcctctggagtagagggaaagacaatactaagtcaagtatagaggttgaatatgtg
ccacgtaaagaggaaacagaggaggccagtccaactgaggcacccatacaattcaacatg
aaaatcatgtga
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