Lates calcarifer (barramundi perch): 108887837
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Entry
108887837 CDS
T04895
Symbol
cpeb1b
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1 isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04114
Oocyte meiosis
lcf04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
108887837 (cpeb1b)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
108887837 (cpeb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108887837 (cpeb1b)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108887837 (cpeb1b)
Factors involved in mRNA localization
Trans-acting binding proteins
108887837 (cpeb1b)
mRNA cycle factors
P-body specific factors
108887837 (cpeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
108887837
NCBI-ProteinID:
XP_018538951
UniProt:
A0A4W6EPE9
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All DBs
Position
LG2:complement(9294118..9308515)
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AA seq
578 aa
AA seq
DB search
MAFSLRNDPRRPESPDSESPALSTCSNADIFRRMNTMLGNALDFTGVCTTPNSAKGKPDL
LCESELAAVGSRRMLFPNCGGMPGSQEMPSSRGPPGVTDLGLGLQSLRLSGWDKPWSSQE
TDTHASPSQVQTSSPSMLSILNSPFSSILGKPPGYLPPESMSMTADFLEKFPSMARMANR
LDSSSFLDSRSSSPEDSETSGFSSGSDHLCDMLSTLRLSPPLPYLASSMQKDLLRLGSRL
DPQDSSSPLTPPSSASPSSSAISRRWRTGSPWPGADMLDQSDDAFSIEREARLHRQAAAV
NEATFTWSGQLPPRNNKDPLYSCKVFLGGVPWDITEAGLINTFSGYGPLTVEWPGKDGKH
PRCPPKGNVAKGYVYLVFENEKSVRALLHACSQDPFHPEDNREYYFKMSSRRMRCKDVQV
IPWVISDSNYVRCPAQRLDPSKTVFVGALHGMLNAEALASIMNDLFGGVMYAGIDTDKHK
YPIGSGRVTFNNQRSYLKAVCAAFVEIKTPKFTKKVQIDPYLEDSMCQVCLRQPGPFFCR
DQACFKYYCRSCWHWQHSMDILSNHRPLMRNQKNRDSS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttccctgagaaacgacccccgcaggccggagagcccggactcggagtccccg
gccctgtccacctgcagcaacgcggacatctttcgcaggatgaacaccatgctgggcaac
gctttggatttcaccggtgtgtgcaccacacccaacagcgccaaggggaagccagacctg
ctgtgtgagtcagagctggctgcagtgggcagcaggaggatgctcttccccaactgtggt
ggcatgcccggctcccaggagatgccgtcatccaggggcccaccgggtgtcacagacctg
ggcctgggcctccagtctctccgtctgtccggctgggacaaaccctggagcagccaggag
acggacacacacgcctccccctcccaggttcagaccagctcaccctctatgctaagtata
ctgaacagtcccttcagtagcatccttggaaagcccccaggctacctgccccctgagtcc
atgagcatgactgctgacttcctggagaagttccccagcatggctcgcatggcaaaccga
ctggattcaagctcttttctggactctcgctccagcagtcctgaagactcagagaccagt
ggcttcagctctggctcagaccacctctgtgacatgctgtcgactttgcggctttcccct
cccctgccttatctcgcatcaagcatgcagaaggatctgctgcgtctgggttcccgtctg
gacccccaggactccagttctcccctgaccccaccatccagtgccagcccctcctcctca
gccatttcccgccgttggcgtactggctctccatggcctggcgccgacatgcttgaccag
tcggatgacgcattcagcatcgagagggaggctcgcctacacaggcaggctgcagctgtg
aatgaagccacattcacctggagcggtcagctgcctcccagaaacaacaaggatcctctg
tattcctgcaaggtctttcttggtggtgtgccctgggacatcacggaagctggcctgatc
aacaccttcagtggttatggccctctgactgtggagtggccgggtaaggatggaaagcac
cctcgctgccctcccaaaggtaatgtggccaaaggttatgtttacctggtgtttgagaat
gagaagtctgttcgggcattgctccacgcctgctcccaggacccgtttcaccctgaggac
aacagagaatactacttcaagatgtccagccgcagaatgagatgcaaggatgtgcaggtc
atcccctgggtgatttctgacagtaactatgtgcgctgccctgcccagcgtttggacccc
agtaagactgtgtttgttggtgcgctgcatggcatgttgaatgctgaggcgttggccagc
atcatgaatgacctgtttggaggagtcatgtacgctggcattgacacggacaagcacaag
tacccaataggctctggacgtgtcacttttaacaatcagcgcagttatctgaaggctgtg
tgtgcagcatttgtggagattaaaacacccaagtttacaaagaaggtccagattgacccc
tacctggaagactcaatgtgtcaagtttgccttcgccaacctggacctttcttctgcaga
gaccaggcctgcttcaagtactactgccgctcttgctggcactggcagcactccatggac
atcttgagcaaccaccggcccctcatgcgcaaccagaagaacagagactccagctag
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