KEGG   Lates calcarifer (barramundi perch): 108887843
Entry
108887843         CDS       T04895                                 
Name
(RefSeq) sorting nexin-1 isoform X1
  KO
K17917  sorting nexin-1/2
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108887843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108887843
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lcf04990]
    108887843
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    108887843
Domain-containing proteins not elsewhere classified [BR:lcf04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   108887843
SSDB
Motif
Pfam: Vps5 PX Sorting_nexin BAR_3_WASP_bdg FAM92 DUF2203
Other DBs
NCBI-GeneID: 108887843
NCBI-ProteinID: XP_018538975
UniProt: A0AAJ7PUH0
LinkDB
Position
LG2:9231164..9239141
AA seq 523 aa
MAASSDRNPPPFPAAEEPEAGLCDMADGDSDEGEDIFVSNSNPVAVSRGVSQPDHVSEEP
PDLFSEEETINTTAKSNGVHSDDDNDLFGEAHVELSTDKPGSSGRKELSASSGPRPASSF
AQSPASMEPTSLEQLEEEEAKDSFDVDVAVTNPEKIGDGMNAYVAYKVSTRTSLPMFRSK
TFSVRRRFSDFLGLYEKLSVKQSLHGCVIPPPPEKSVVGMTKVKVGMDDPSSVEFVERRR
AALERYLQRVVSHPSLLQDPDVREFLERDDLPRAVNTQALSGAGFLKMINKASDAVNKMT
IKMNESDTWFEDKFQEVENEEQQLRKLHAVVDSLVNHRKELCGNTAVFAKSMAMLGNSED
NTALSRALSQLAEVEDKMEQLHQEQAASDFFIFAELLADYIRLLGAVRGCFDQRMRAWQR
WQEAQSTLQKKREAEAKLLWANKPDKLQQAKEEIAEWEARVTQYERDFDRIGMTVRKEVL
RFEKEKAKDFKSQIIKYLEAMLQSQQRLIKFWEAFLPEAKAIA
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggcggccagctcagacaggaatcctcctcctttccccgcagctgaggagccagaagct
ggactgtgtgacatggcagatggagacagcgacgagggagaggacatcttcgttagtaac
agtaaccctgtggctgtgagtcgaggagtttctcagccggaccatgtcagtgaagagcct
ccagatttgttcagtgaggaggagaccatcaacacaactgccaaatccaacggagttcac
tctgatgatgacaacgacctgtttggtgaggcacatgtggagctgagcacagacaagcct
ggtagctctggtaggaaggagctctccgcctcttctggccctcgtcctgcctcctcgttc
gctcagagccctgcatccatggagcccacctccttggagcagttggaggaggaagaagct
aaggacagttttgatgtggatgttgctgtcaccaaccctgagaaaattggagacggcatg
aacgcatatgtggcctacaaagtatccaccaggacttccttgcccatgttcaggagtaag
accttctctgtgaggaggcgtttcagtgacttcctgggtctttatgagaagctgtctgtc
aagcaatcgctccatggctgcgtcattccaccaccacctgagaaaagcgttgtaggaatg
accaaggtgaaggtgggaatggacgacccatcgtcagtagagtttgtggagagaaggaga
gcagctctggagagatatcttcagagagtggtgtctcatccatcgttactgcaagatcct
gatgtccgtgaattcttggagagagacgatctacccagggcagtgaacacccaggcgctg
agtggagctggtttcctcaagatgatcaataaggcatcagatgctgtcaacaagatgacc
atcaagatgaatgagtctgacacttggtttgaggacaagtttcaggaggtggagaatgag
gagcagcagttgagaaagcttcatgccgtggtcgactccctggttaatcacaggaaggag
ctgtgtgggaacacagcagtatttgccaaaagtatggccatgttgggaaactctgaggac
aacacagccctgtcacgggccctgtcccagctggcagaggtggaggacaagatggagcag
ctgcatcaggagcaggcagccagtgacttcttcatctttgcagagctgctggctgactac
atccgcttgctgggtgctgtgcggggctgttttgaccagcgcatgcgggcgtggcaacga
tggcaggaggctcagagcacactccagaagaagagagaggccgaggccaagctgctgtgg
gccaacaagccggataaactgcagcaggccaaagaggagatcgctgagtgggaggcgaga
gttactcagtacgagagagactttgacaggattggcatgactgtacgcaaggaggttctt
agatttgagaaagaaaaagccaaggatttcaagagccagataatcaaatatttggaggca
atgctgcagtctcaacaacggctcataaagttttgggaggcattcctgcctgaggcaaag
gcaatagcttaa

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