Lates calcarifer (barramundi perch): 108887846
Help
Entry
108887846 CDS
T04895
Name
(RefSeq) Bardet-Biedl syndrome 4 protein isoform X1
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108887846
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108887846
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
108887846
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
BBSome
108887846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
TPR_16
ANAPC3
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_7
TPR_15
ARM_TT21_2nd
ARM_TT21_4th
TPR_Slam
ARM_TT21_N
NatA_aux_su
TPR_10
ARM_TT21_C
PknG_TPR
Wzy_C_2
TPR_20
HAT_PRP39_C
ChAPs
TPR_MalT
HrpB1_HrpK
Clathrin
Motif
Other DBs
NCBI-GeneID:
108887846
NCBI-ProteinID:
XP_018538976
UniProt:
A0A4W6EYU8
LinkDB
All DBs
Position
LG2:9018501..9030402
Genome browser
AA seq
545 aa
AA seq
DB search
MVTASTVDHPKMADQEVTTALPVSTEAKKRRAPKAPELPIVERRNWLIHQHYIRKDYDTC
KAIIKEQLQETNGMCEYAIYVQALILRLEGKIQQSLELFQSCAILNPSSADNLKQVARSL
FLLGKHKAAIEFYHEAARLNEKDWEISHNLGLCYFFIKDFKNAEEHLNIALQINKHDKTF
MMLGKVHLLAGETDKAIEVYKRAVEYSPENTELLTTLGLLYLQLGKYQKAFEHLGNALTF
DPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAIS
CLKRAHYLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNL
EDVENATRAYEQAVTLDESNPLVNLNFAIFLYNHGDKKGALDQYQEMERKVNLLRDSSSN
FEFDPELMDMAQKMGAALQVADSLVWTKPGKDSKSKPNSAAATKTPGAPLGTNQALGQAM
SSAASYNKNIQLPTGVSKGPSMPLEPEPDVDKAPSPPTDLPGSPEPAESDNPKSRTSKRK
TKVEE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagcttctactgttgatcatcccaagatggcggaccaagaggtaaccacggcg
ctcccagtttctactgaagccaagaaacgacgggcacccaaagccccagagcttcccatt
gtggagaggagaaattggctaatccaccagcactatatccgcaaagactatgatacctgt
aaggcaatcatcaaagaacaactccaggagactaatggaatgtgtgaatatgccatatat
gttcaagcactaatcttgcgtcttgagggcaagatccaacagtccctggagctgtttcag
agctgtgccatccttaatcccagcagtgctgacaatctcaagcaagtggccagatcccta
tttctcctgggaaagcacaaagcagccattgaattctatcatgaagctgcaagactcaac
gagaaagactgggagatcagtcataatctgggtctgtgctatttcttcatcaaagacttc
aaaaatgctgaagagcatctaaacatagctctacagataaataaacatgacaagactttc
atgatgcttgggaaagttcatttgctggcaggagaaactgacaaagccattgaagtgtat
aagagagcagtggaatactccccagagaatactgaactcctgactactcttggcctgctg
tatttacagcttgggaaataccaaaaagcatttgagcaccttggaaatgccctcactttc
gaccccaacaactataaggccatcctggctgcaggcagtatgatgcagacccatggtgac
tttgatgtggccatgaacaagtaccgagtagcggcatgtgctgtgccagagagcccccct
ctctggaacaacatcggcatgtgcttctttgggaaaaagaaatatgtagctgccatcagc
tgcctgaaacgggcccactacttgtctccttttgactggaaagtgttgtacaacttgggt
ctagttcacctgaccatgcagcagtacgcttcagccttccacttcctcagtgcagccatc
aacctgaaccctcggatgggggaactctatatgttgctggcagtggccctgaccaacttg
gaggatgtcgagaatgccaccagagcgtatgaacaagctgtgactctggacgaatccaac
cctctggttaacctgaactttgcaatcttcctctataatcatggtgacaagaagggagct
ctggatcagtatcaggagatggaaaggaaagtcaacctgcttcgagacagcagtagcaac
tttgaatttgatccggagctgatggacatggctcagaagatgggagctgccctgcaggtg
gcagatagtctggtgtggactaaaccaggcaaggactccaaatcaaaaccaaactcagca
gcagccaccaaaacccctggcgcgcccctcggtactaaccaagccctgggtcaggccatg
tcttctgctgcaagctacaacaagaacatccagctaccaacaggagtttctaaaggcccc
tccatgccccttgagccagaacctgatgtggacaaagcccccagcccgcccactgatctt
ccaggttcaccagaacccgcagagtcagacaaccccaaatccagaacctccaagaggaaa
actaaggtggaggaatga
DBGET
integrated database retrieval system
