Lates calcarifer (barramundi perch): 108887853
Help
Entry
108887853 CDS
T04895
Name
(RefSeq) activating signal cointegrator 1 isoform X1
KO
K23398
activating signal cointegrator 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108887853
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
108887853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRI4_N
TRIP4_3rd
ASCH
zf-C2HC5
Helical_CED_Drosha
WHD_MCM8
Motif
Other DBs
NCBI-GeneID:
108887853
NCBI-ProteinID:
XP_018538995
UniProt:
A0A4W6F3M3
LinkDB
All DBs
Position
LG2:8722111..8788955
Genome browser
AA seq
575 aa
AA seq
DB search
MSDALLQWCVDQLHHKFGLEACEDIVKYILSIEKAEEIEEYVGDLLQGTDGRKRQFIDEL
LSRWKRTQRQAADTSNLFLLTESVSSSDSQDLTKDTQKKSKRKGRNKQEVMTVSQTEPEP
EAVKTPIDLMRAQENSGMSSTKKKSKFVNLYAKEGQDRLSVLIPGRHACECLAQKHKLIN
NCISCGHIVCEQEGSGPCLFCGSLVCTKEEQEILQRDSNKSQKLRKKLMGDCGERDYLPH
QEAKMKAGLEKAVQHKDKLLEYDRNSVRRTQVLDDESDYFATDSNQWLSPSEREKLRKKE
EELRELRHVSRKDRKITLDFAGRQVIDEENNLNEYYSKLDETLKAMNSDTTSKPPTSSGR
QGARHGLRDLVNPNIMQSAPEWVNVGGSENKRDRRNKEQGKSLSEDKGGEERNRLRLQDK
ELQEMSDGGWCLSMHQPWASLLVKGIKRVEGRTWYTSHRGRLWIAAAAKKPTPQEIAEVE
AMYRQIYKKEPRFPKDYPTGCLLGCVNMTDCLSQQQFREQFPDTCEESSSPFVFICTNPQ
ELLVKFPMKGKHKIWKLESHYHQGAKKGLVPSAAE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgctttgctgcagtggtgtgtggaccagttacaccacaagttcgggttggag
gcatgtgaggacatcgtcaaatacattctatccattgaaaaagctgaagagattgaggag
tatgtgggagacctcctgcagggcacagatgggagaaaaaggcagtttatagatgagctc
ctcagcagatggaagaggactcaaagacaggccgcagatacctctaatctcttccttctc
acagaatctgtttcatcatcagattcacaagacctgaccaaagacacccagaagaagtct
aaacgtaagggccgcaacaaacaggaggtgatgactgtgagccaaactgaacctgagcca
gaggcagtcaaaacccccattgatctaatgagggcccaagaaaacagtggtatgtcttca
acaaagaagaagagtaaatttgtgaatctctatgccaaagagggacaggacaggctttct
gtcttaatccctggtagacatgcctgtgagtgccttgctcaaaagcacaaacttattaac
aactgcatcagctgtggtcacatcgtgtgtgagcaggagggctcaggaccctgcctcttc
tgtggaagcctggtctgcacgaaagaggagcaggagatcctgcagcgagactccaacaaa
agccagaaactaagaaaaaagctcatgggagactgtggagaaagagattatctccctcac
caagaagccaagatgaaagctggcttggagaaggctgtccagcacaaggacaaactgctg
gaatacgacaggaatagtgtcaggagaacacaagtcctagatgatgagtctgattacttt
gccactgactccaatcagtggttgtcacccagtgagcgagaaaagctgaggaagaaggaa
gaggagcttagagaacttcgccatgtctcgcgcaaggatagaaagatcacattggacttt
gctggtagacaagtgattgatgaagaaaacaacctcaatgagtactacagcaagttggat
gagaccctcaaggctatgaacagtgacactacatcaaagccaccaacgagttctggaaga
caaggtgcaagacacggtctcagagatttggtcaaccccaacataatgcagtctgcacca
gagtgggtgaatgttggaggcagtgaaaacaagagagacaggagaaacaaagagcagggg
aaaagtttgtcagaggacaagggaggagaagaacgtaacaggctgcggctccaggacaaa
gagctgcaagagatgtctgacggaggttggtgcctcagcatgcaccagccgtgggcctca
ctgcttgtcaaaggcatcaagagggtagagggacggacttggtacacatcacaccgaggt
cgcctttggattgctgctgcagccaagaagcccacccctcaggagattgctgaggtggaa
gccatgtaccgccagatctacaagaaagagcccaggtttcctaaagactaccccactggc
tgtctgttgggctgtgtcaacatgactgactgcctctctcagcagcagttcagagaacag
ttccctgatacctgtgaggagtcctcttccccattcgtcttcatctgcaccaacccccag
gagctgctggtgaaattccccatgaaagggaagcacaagatctggaagctggagagtcac
taccaccagggtgccaagaaggggctggtcccatcagctgcagagtga
DBGET
integrated database retrieval system
