Lates calcarifer (barramundi perch): 108887863
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Entry
108887863 CDS
T04895
Name
(RefSeq) acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1
KO
K18646
acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108887863
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108887863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_6
LRR_8
LRR_1
LRR_14
LRR_NXF1-5
LRR_Zer-1
LRR_FBXL18
LRR_At5g56370
LRR_EndoS
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
108887863
NCBI-ProteinID:
XP_018539016
UniProt:
A0AAJ7V7B2
LinkDB
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Position
LG2:8482485..8489266
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AA seq
254 aa
AA seq
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MDMKKRIHLELRNRTPSDVKELVLDNCRSNEGKIEGLTDEFEELEFLSTINVGLTTVAHL
PKLNKLKKLELSDNRISGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKELGTLKSLDL
FNCEVTNLNEYRDNVFKLLPQLTYLDGYDKDDKEAPDSDAEVYAEGLDDDEEDEDDVDEE
DYDEDAAPGDEEEEEGEEDEEENEEEEEDDLSGEEEEEEDLNDREVDDEDDEEEERGQKR
KRELDEEGEEDEDD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaagaaaagaattcacctagagttgcggaaccgcactccgtcagacgtcaaa
gaacttgtgctagacaactgtcgctcaaacgaaggcaagatcgagggtctaacagatgaa
tttgaggagctggaatttctaagcacaatcaacgttggactgacgacagttgcccacttg
ccaaagctaaataaactcaaaaagcttgaactcagcgataacaggatctcaggagggttg
gaagttctggcagagaagtgccccaacctcacacatctcaacctcagtggcaacaagatt
aaagacctcagcacaatagaaccattgaaagaattggggaccctgaaaagtctagatctg
tttaactgtgaagtgacgaacctgaatgaatacagagacaacgtattcaaactactaccc
cagctcacgtacctggatgggtatgacaaagatgacaaagaggcaccagattccgatgct
gaggtttacgcggagggcttggacgatgacgaggaagatgaagatgatgtagatgaggag
gattatgatgaagatgcagcaccaggagatgaagaggaggaagagggagaggaggatgaa
gaggagaatgaagaagaggaagaggacgacctcagtggagaggaggaagaagaggaagat
ttgaatgacagagaggttgatgatgaggatgatgaggaagaagagcgaggtcagaagaga
aaaagggaactggatgaagaaggggaggaggatgaagacgattga
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