Lates calcarifer (barramundi perch): 108887864
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Entry
108887864 CDS
T04895
Symbol
glceb
Name
(RefSeq) D-glucuronyl C5-epimerase B
KO
K01793
heparosan-N-sulfate-glucuronate 5-epimerase [EC:
5.1.3.17
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf01100
Metabolic pathways
Module
lcf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108887864 (glceb)
Enzymes [BR:
lcf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.17 heparosan-N-sulfate-glucuronate 5-epimerase
108887864 (glceb)
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Paralog
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Motif
Pfam:
C5-epim_C
Glce_b_sandwich
Motif
Other DBs
NCBI-GeneID:
108887864
NCBI-ProteinID:
XP_018539018
UniProt:
A0A4W6F6Y2
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Position
LG2:complement(8414466..8464521)
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AA seq
597 aa
AA seq
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MRCLAARVNYKTLIVICALFTLITVLLWNRCSSDTSLRFLPRAALVAPSPKVGDASISSQ
QQQQPPQPPEPPPVVGLVGGIKYEEIDCLINDESTIKGRREGAEIYLPFSWMEKYFEVYG
KVVQYDGYDRFEFQHSYSKVYTQREPYHPDGVFMSFEGYNVEVRDRVKCISGVEGVPLST
QWGPQGYFYAIQIAQYGLSHYSKNLTERPPHMEVYDTAEERDSRASTAPWSVSKGASLSR
VHDKIRATSVRQFSAPESSEGVSLQLGNSKDFILSLDIKFISNGSVSVILETTEKGPPFT
IRYVTNTQLIAFKDHEITYGIGPRTTWSTLTRDLLTDLRKGVGLSNTKAVKATKIMPRRV
VRLVLHGRGFVDNVTISTTAHMAAFFAASDWLVRNQDERGGWPIMVTRKLGEGFRPLEPG
WYSAMAQGQAMSTLVRAYLLTKDQVYLNAALKAVGPYKVPSAQHGVKAVFMNKYDWYEEY
PTTPSSFVLNGFIYSLLGLYDLTETAGEKLGREAGQLFSRGMESLKAMLPLFDTGSGSIY
DLRHFMLGIAPNLARWDYHTTHINQLQLLASIDNAPIFKDVVKRWKNYLKGIRAKHN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcctggctgctcgggtgaactacaagaccctcatcgtcatctgtgccctcttc
acgctcatcactgtgttgctgtggaaccgatgctccagcgacacctccctacgcttcctg
ccccgcgccgccttagtggctccgagtcccaaggtgggggatgctagcatcagcagccaa
caacaacaacaacctccacaacctccagagcccccgcccgttgttgggcttgttggcgga
atcaagtacgaggaaatcgactgcctgatcaatgatgaatcgacaattaaagggcggcga
gagggtgcagagatctacctacccttctcttggatggaaaaatactttgaggtgtatggc
aaagtggtgcagtatgatggctacgatcgtttcgagttccagcacagctattcaaaggtt
tacacgcagcgtgagccctaccaccctgacggagtcttcatgtcatttgagggatacaat
gtggaggtccgagatcgtgtcaagtgtataagtggagtggaaggcgtgcctctgtccacc
cagtggggccctcagggctacttctatgccatccagattgcccaatacggtttgagccat
tacagcaaaaacctgactgagcgccctccccacatggaggtctacgatacagccgaggag
agagacagtcgggccagcacagcgccctggagtgtgtcaaaaggtgccagccttagccgt
gtccacgacaagatccgggctacctccgtgcgtcagttcagtgctccagagtcctcagaa
ggtgtttccctccagctgggtaactccaaagacttcatcctcagcttggacatcaagttc
atctccaatggcagcgtgtccgtgatccttgaaaccacggagaagggcccaccctttacc
attcgatatgtgaccaacacgcagctcattgccttcaaagatcatgaaatcacgtatggg
atcgggccgcggaccacctggagcactctgacccgagacttgctcactgacctcaggaag
ggcgtcgggctgtccaacaccaaggctgtgaaggccacaaagatcatgcccagacgggtg
gtgcggttggtcctacatgggcgtggctttgtcgacaacgtcactatctccaccactgcc
cacatggccgccttctttgctgccagcgactggctggtgcgcaaccaggacgaaagaggt
gggtggcccatcatggtcactcgaaaactgggtgaaggcttccggcccctggagcccggc
tggtactcggccatggctcagggccaggccatgtccaccctggtgagagcctacctcctc
accaaggaccaggtttacctcaatgctgccctcaaggcagtaggaccctacaaggtgcct
tcagcgcagcacggggtcaaagctgtgttcatgaacaaatatgactggtatgaggaatac
cccaccacacccagctcctttgtcctcaacggcttcatctactccctgttaggactctat
gacttgactgagacagccggagagaaacttggcagggaggcagggcagctgttcagccgt
ggcatggagtcactgaaggccatgctgccgctctttgacacagggtcagggagcatctat
gacctgcgtcacttcatgctgggcattgcgcccaacctggcgcgctgggactaccacacc
acgcacattaaccagctacagctgctggcatccatagacaatgctcccatcttcaaagat
gtggttaagcgctggaaaaactacttaaaagggattcgtgccaagcacaactag
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