Lates calcarifer (barramundi perch): 108887867
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Entry
108887867 CDS
T04895
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108887867 (sall3a)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108887867 (sall3a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108887867 (sall3a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108887867 (sall3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
TDBD
zf-C2H2_11
zf-C2H2_15
IZUMO
UBZ_FAAP20
zf-H2C2_5
DUF2225
NinF
Motif
Other DBs
NCBI-GeneID:
108887867
NCBI-ProteinID:
XP_018539038
UniProt:
A0A4W6EC52
LinkDB
All DBs
Position
LG15:28654403..28670784
Genome browser
AA seq
1336 aa
AA seq
DB search
MSRRKQAKPQHLKSDEDPALAGGVISEHARGDVLDDADSGNESRSGSEETHVCEKCCAEF
FKWSDFCEHLKSCTKNPLVLIVNDNEDTPNPSQEYPTEPSPVPSCPSEQADSEDPREGDH
SPAGEGDDVPETATLNGVNVLEKEDEQMELELSPEKTMDPEERDVTSPEPDGSLPQLNDV
VPSTVTNYTMPSTNVTLETLHGTRVAVAQFSQSVRAAAGSGVSTMAIPMILDQLMALQQQ
QIHQLQLIEQIRSQVALMNRQSATQPALSHHHSNAVGNQGPVSSCVPPVASQLQLHNFIT
PPVHQLPVRLPATLNSQGPSPLTSAIEGPLSQTPQSGSQQSNSSIPNTSSNNSAFPQPSG
TGLSSLIPPCSSSVTNNNISTSSSVTGGGGISSSSALPRNSTTPPSLSHSSLLSSASSLP
LIPHSSSSSVIFPNPLASIAATANALDPLSALMKHRKGKPPNVSVFDTKPSSEDPFFKHK
CRFCAKVFGSDSALQIHLRSHTGERPYKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNP
YPVPEYLDNVPTSSGIPYGMSLPPEKPVTTWLDSKPVLPTVPTSVGLQLPPTLPSMMGGF
GESPSLTPLNRSPQRPSPPSSECASLSPNIVTDSGMTTTSPSPKPSLGSDAPPLLKPEGV
LLPASCSTRPGENTTTTTTVTQVVLSTTVTSTTSSSSGQVTDPITSPNSVSNPVSHPVLP
MLSDQFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMH
YRIHTGERPFKCKICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQH
IRMHMGGQIPNTPVPESLQEMDTDLSFDEKSLDAMSNYDDDLLDEMEQAIDDEADLKEGE
VDPSKPYSPGSSPPTSIISSIAAMENQMKMIDSTANMTRSFGQKPTQNGSSFGGETDCFT
TDSLSAVGDAEGQSLGSPALSESSGSMQHLSPAHSHSESQRSKSPATLNNNNNSSAMTAE
EGQENNAAGLATVKSEKSETPSPLSATEGTGALDLTATQHGRHFIKEESHFNMLFLNRDR
GLNTPNLASTASNMIKMEMNGHGKSVSLSDNSHLPVGIQVPAATPQTTMSPSINPMLAPP
PPRRTPKQHNCHSCGKNFSSASALQIHERTHTGEKPFACSICGRAFTTKGNLKVHMGTHM
WNNAPARRGRRLSVENPMALLGGDAMKFSEMFQKDLAARAMNVDPGFWNQYAAAITNGLA
MKNNEISVIQNGGITQLPVSLGGAGITSLGAMPGGMDRVHTGSSPPMTGMEKAGLEVGAS
RPFSRFMEENKEIGIN
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaagccaagccgcagcacctcaagtcggacgaggatcccgcacta
gccggtggggtgatttccgagcacgcacgaggtgatgtgctggatgatgccgacagtggg
aatgagagccgcagcggcagtgaggagacccatgtatgtgagaagtgttgtgctgagttc
ttcaagtggtcagacttctgtgaacatttaaagagctgcaccaagaaccccctggtgctc
atagtgaatgacaatgaggacacacctaacccctcccaggaatatccaacagagccctcc
cctgtacccagctgccccagtgagcaggctgacagcgaggaccccagggagggcgaccac
agtcctgctggtgagggggatgacgtcccagagacagcaaccttaaatggggtcaatgtc
ctagaaaaggaggacgagcagatggagctggagctttcccctgaaaaaactatggatcct
gaagagagagatgtgacatcccctgagccagacggctccctacctcagctcaatgatgtc
gtcccctccactgttacaaactacaccatgccaagcaccaatgttaccttggagactctg
catggcacccgggttgcagttgcccaattttcacaaagtgtaagggcagcagcgggcagt
ggggtctccactatggctattcccatgatcctggatcagctgatggcccttcagcagcag
cagatacaccagctgcagctgatagaacaaatacgcagtcaggtggctctgatgaacaga
cagtctgccacacagcctgctctcagtcaccatcacagcaatgctgttggaaaccaggga
cctgtatcctcctgtgtcccccctgttgctagtcagcttcagcttcacaacttcatcacc
cctcctgtccatcagctgcctgttaggttgccggccactctcaatagtcaaggcccttca
cccctgacctcagcaatagagggccctctctctcaaacaccacaaagtggcagtcagcag
tctaactcttcaatccctaacacatcctcaaataattcggcgtttccccagcccagtggt
actggcttgtcatctctaattcccccttgctcatcctcagtcacaaacaacaacattagc
actagtagtagtgtaacaggaggtggtggcattagcagcagttcggctcttcccaggaac
tccaccacccctccctcactcagccacagtagcctcctgagctctgcctccagtctacca
ctgatacctcacagctcgtccagcagtgttatcttccccaaccccctggccagcatagca
gccacagccaatgcgctcgaccccctctctgctctaatgaagcaccgcaaggggaagccc
ccaaatgtgtctgtgtttgacactaagcccagctccgaggaccccttcttcaagcataag
tgtcggttctgcgccaaggtgtttggcagtgacagcgccctacagatccacctgcgttcc
cacactggagaaaggccctacaaatgcaacatatgtggcaaccgcttctccaccaagggg
aatctgaaagttcatttccagagacacaaagagaaatacccacatattcagatgaaccct
taccctgtgccagagtacctggacaatgttcccacaagctcaggcatcccatatggcatg
tctttgcccccagaaaagcctgtaaccacatggctagacagcaaacctgtcctccccact
gttcccacctcagtcgggctccagctgcctcccacgctgccgagtatgatgggaggtttt
ggtgaatccccaagtctcacaccgctcaataggtcccctcagaggccatctccaccttca
agcgagtgtgcatctttgtcccctaatattgtcaccgactctggcatgaccactacttca
ccctccccaaagcccagcctagggagtgacgcacctcctctcttgaaacctgaaggtgtt
ctcttgcctgcaagctgctccactaggccaggagagaataccaccaccacaactacagta
actcaagtggtcctttccactactgtcacctccaccacatcatccagcagtggccaggtc
actgaccccatcactagccccaactctgtttctaaccctgtctcccatcctgtccttccc
atgctctcagaccagtttaaggccaagtttccctttggtggcctactagactctatgcaa
acctcagagacatcaaagttgcagcagcttgttgaaaatattgacaagaagatgactgac
ccaaaccagtgcgtcatctgtcatcgtgttctgagctgccagagtgctctcaagatgcac
taccgtatccacactggggagaggcctttcaaatgcaagatatgtgggcgggcattcacc
accaaggggaacctgaaaacacactttggtgtccataggtccaaaccccctcttcgggtc
caacactcctgccctatatgtcagaaaaagttcaccaatgccgttgtgcttcagcagcac
atccgtatgcatatgggagggcagatccccaacactccggtccctgaaagcctgcaggag
atggacactgacctctcctttgacgagaagagcttagatgcaatgagtaattatgatgat
gaccttctggatgaaatggagcaggctattgatgacgaagctgacttgaaagagggagag
gtggacccatctaaaccttattcacctgggagctccccaccaacttccatcatctccagc
attgctgcaatggagaaccagatgaagatgattgactccactgccaacatgacccgttca
tttggtcagaagcccacgcagaacggcagcagctttggaggagagactgattgctttacc
accgattccctgtctgcagtgggggatgctgaaggtcaaagcttggggagtcctgctttg
tctgagtcctctggctctatgcagcatttgtccccagctcacagccactctgagagccag
cgatccaagtccccagctacactcaacaataataacaacagcagtgccatgacagcagag
gagggccaggagaacaatgcagctggcttggcaacagtgaagtcggaaaaatcagagacc
ccatctccgctttctgctactgaaggcactggggcccttgacctgactgccactcaacat
ggcaggcactttatcaaggaggagagccacttcaacatgctgtttctaaatagggatcga
gggctgaacactcctaatttggccagcactgcatcaaacatgatcaaaatggaaatgaat
ggacatggcaagtcagtgtctctgagcgacaactctcacttgcctgtgggcatccaggtt
cctgctgcaacaccccagaccaccatgagccccagcatcaaccccatgttggctccccca
cctcctcgacgcactccaaagcagcacaactgccactcatgtgggaagaatttttcttca
gccagtgctctgcaaatccatgagcgtacacacactggggaaaaaccattcgcttgctcc
atttgtggaagggctttcaccacaaagggcaatctgaaggttcacatgggaacacacatg
tggaacaacgccccagcccgaaggggtcggcgactatccgtagagaatcccatggccctg
ctgggcggggatgccatgaagttcagcgagatgttccagaaggatctcgcagctcgggcc
atgaacgtcgatccgggcttttggaaccagtacgcagccgccatcaccaatgggctggcc
atgaaaaacaatgaaatctctgtgatccagaacggaggcatcacccaactgcccgtcagt
ctcggtggcgcaggaatcacttcattgggagccatgcctggaggaatggaccgtgttcac
acaggcagcagccctcccatgactggtatggaaaaggctggtctggaggtcggggccagc
cgccccttctccagatttatggaggagaacaaagagatcgggatcaattaa
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