Lates calcarifer (barramundi perch): 108887910
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Entry
108887910 CDS
T04895
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
lcf
Lates calcarifer (barramundi perch)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108887910
NCBI-ProteinID:
XP_018539113
UniProt:
A0A4W6C763
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Position
LG2:7430162..7450906
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AA seq
1113 aa
AA seq
DB search
MGQRAALLLSELLLLLLLTASRTLLAVSFPEDIIPLDIVDAHFSRRYPVFRGRPSGNESQ
HRLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQTDRDMCAVKGKR
REECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLELDGEEINGLARCPFDSKQTN
VALFAEGKLYSATVADFQASDSVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVY
FFYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYF
DVLQSITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFWGRFKEQKTPDSVW
TPYPEEKLPKPRPGCCAGHGPAASFKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTK
TRVRYRLTALAVDNEAGPHKNYTVVFIGAESGVVLKVLAKTTSVSLNDSLLLEEIDVFNR
AKCLSNREDDKRVLSLHVDKDAHSLYVAFSSCVIRIPLSRCERHSSCHKSCIASRDPYCG
WKPHGACERIPPGVLTGYEQDVEFGNTAHLGDCHAFLGTTSAPDYKSFGDPTSDMEFSSA
PVTVQPSGPIHPPVLIPTQSPSSGPGPELYGSGFVLQDDPATSHSLDSIPGGHEGVWDIQ
AGETNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRRVHKDAESAPSCSDST
GSFVKLNGLFDSPVKEYQTNIDSPKLYTNLLSNGKDLNTPNGDTKTMILREGCQPPELAA
LPTPESTPVLQQKGLQPIKNQWERAQGKVSGPRKESNSSATAKSPQFLPSSPAPPNANSH
HPHPALGHSHIPSAVVLPNATHDHPNLDSGDDTLPHSSEKKLKNPDSRGSRKDQKRSVDA
RNTLNDLLKHLNDSVANPKAILQEGSGPRPRQHLTLEPMEELTEVPPKVPSREASLYSPS
SSLPRHSPTKRVDVPMPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSPSGVT
MGVSVSRQHSMNRGGYMPPTPPSRLDSHGGVMGAGMHSAHPPSVSRQSSYSGHGSLPRTG
LKRTPSLKPDVPPKPNGFSPQTPQMRVVNKYSY
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgcgcttctgctcagtgagctgctgttgctgctgctgctgacagcc
tcacgcactctcctcgcagtcagcttccccgaggacattatacccctcgacatcgttgac
gcacacttttcacggaggtaccctgtgttcagaggcaggccctctggcaatgagtcacag
catcgccttgattttcagctgatgaccaagatacaggacacactgttcattgctggcaga
gatcaggtgtaccttgtcagtctgagagaatcctacaggaatgagatcattccttaccgg
aaactaacgtggcgatcgggccaaactgacagagacatgtgtgctgtcaagggaaaacgc
agagaggagtgccacaacttcatcaaagtgctggtccccagaaacgacgacctggtattc
atctgtggtaccaacggcttcaaccccatgtgcagatactacaggctggataacctagag
ttagatggagaggagatcaatggactggcacggtgcccgtttgactccaagcaaaccaac
gttgccctttttgctgagggaaagctgtactctgccactgtagctgacttccaggccagt
gattctgtcatctatcgcagtatgggtgatggatcagctttgaggactatcaaatatgac
tccaaatggcttaaagaacctcatttcctgcacgcagcagagtatgggaattatgtgtac
tttttctaccgagagattgcagtggagcacagcaatctgggcaaggttgtgtattcccgt
gtggcccggatctgtaagaatgacgttggtgggtcacagcgggtgctggagaagcactgg
acgtcttttgtgaaggcgaggctgaactgctctgtgccaggggagtcctttttctatttt
gatgtgcttcagtccattactgacatcatcaacatcaatggagttccctctgtggtgggt
gtgtttaccacacagatgaacagtatcccagggtcagcagtgtgtgccttctccatggct
gacatagagaaagtattctggggccggttcaaagagcagaagactccagactctgtgtgg
accccgtatccagaggagaagctgcctaaacctcgacccgggtgctgtgcaggtcatggt
ccagctgcgtcctttaagagctccatagagttcccggatgataccctgcagttcatcaag
tcccaccccctcatggacacagctgtgccttccatcggggacgagccttggtttaccaag
acacgcgtcaggtacaggctgacagcgctggctgtggacaatgaagcaggaccccacaag
aactacacagtggtgttcatcggggctgagtcaggtgttgtcctcaaggttttggccaag
accacctctgtgtccctgaatgacagcctgcttctggaggagatagacgtcttcaacagg
gccaagtgcctgtctaaccgtgaggatgacaagcgtgtcctctcgctgcacgtggacaaa
gacgcacacagcctatatgtggccttttcaagctgtgtcatccgtattcccctgagtcgc
tgtgaaaggcactcatcctgccacaagtcctgcattgcatcaagggatccttattgtggc
tggaaacctcatggagcttgtgagaggataccgcctggtgttttgactggatatgagcag
gatgttgaatttggaaacactgcccacctgggagactgtcacgcgtttttgggcactact
tcagcgccagattacaaatcatttggcgatcctacctctgacatggagttttcatctgcg
ccagtcactgtccagcccagtgggcccatacaccccccagtactcatacccactcagagc
cccagctctgggcctggtccagagctctacggctcaggctttgtgctgcaggatgaccca
gccacctcccattctttagactctatcccaggggggcatgagggtgtgtgggatatccaa
gcaggtgagaccaaccagatggtccacatgaacatcctcatcacttgcgtgtttgctgct
ttcctcatgggtgccctcctggctggtctgattgttttctgctaccgagactcattcctt
cgtaagccaagacgtgttcacaaggatgcagagtctgcgccatcgtgctctgactccact
ggaagctttgtgaagctcaatggcctctttgacagtcctgtaaaggagtaccaaaccaac
attgattctcccaagctgtacaccaatctgctgagcaatggcaaagacctgaatacaccc
aatggtgacaccaagaccatgatcctgcgggaaggctgtcagccccctgagctggctgcc
ctgcctacacccgagtccacacctgtgcttcagcagaaaggcctccagcccatcaaaaac
cagtgggagagggctcagggcaaggtcagtgggccccgtaaggagtccaactcatcagcg
acagccaagagtcctcagtttcttccttcttctcctgctcctcccaatgccaactcccac
caccctcacccagccctgggacactcccacatcccgagtgcagttgtcctacccaatgcc
acacatgaccaccctaatcttgacagtggagatgatacactgccacattcgtctgaaaag
aagctgaagaacccagattctaggggaagtaggaaagaccagaagaggtctgtggatgcc
agaaatactctaaatgaccttttaaaacacctcaatgactctgtggccaaccccaaggcc
atacttcaagagggatcagggccccgcccgaggcaacatctcacgctggaacccatggag
gaactgactgaagtaccccccaaggtgcccagccgtgaggcttccctgtactctccctcc
tcctccctgccgaggcacagccccaccaagagggttgatgtgcccatgcccaccactccc
accacaccaacgggcagcctgagcatggggggcaccctggagaggcaaagagggggatat
cagctccaccggagtgcctctcacaggcagtccttatccacttcaccaagtggggtaacc
atgggggtgtctgtgtctcgccaacacagtatgaacagaggtggttacatgccaccaaca
cccccctccagacttgactcccatggtggagtgatgggggcaggaatgcattcagcccac
ccaccttctgtatcccgacagagcagctacagtgggcatggctcactccctcgcacaggg
ctcaaacggaccccatcactaaagccagatgtgccccccaaacccaatgggttttcacca
cagactccacagatgcgagtggtcaataagtacagttattaa
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