Lates calcarifer (barramundi perch): 108887911 Help Entry 108887911         CDS       T04895                                  Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf04142   Lysosome Brite KEGG Orthology (KO) [BR:lcf00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     108887911  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lcf04131]     108887911 Membrane trafficking [BR:lcf04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     108887911  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     108887911    RAVE complex     108887911 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_IFT140_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_RIG_1st NBCH_WD40 Motif Other DBs NCBI-GeneID:  108887911 NCBI-ProteinID:  XP_018539121 UniProt:  A0AAJ7V7I6 LinkDB All DBs Position LG2:complement(7191478..7226757) Genome browser AA seq 3060 aa AA seqDB search MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILASDFECVQIIPGAQNGNIQV GCVECSHQLGRIAASYGNTVCIFEPLSSNPNKRHKQLNYQWQKTGQFFLDAITYNLAWDP QGNRILAATERLQLWAPPLADALIEEEDGQMTEDKPHPVLNDWNCVWQCKTAASVHIAKW SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVQDLSDKKPLPVHFSFVYLAHPRSVTGMS WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETLLPEDSLLGGQISENTQSFSSSLPGLAG NKDKIQHALESIHHLKHLRRGRRRSSALVAHSDLLPSQLGTQDAHTHRHIAHHANALCHF HISASINPNTDIPSVLADSAVFNPDDGTGGGGFVVHWLNNKDLSFTSSMDNFMLQLRKFS EQQLDQTAEDPLDPEGSPMKFDFDLDDMSDKASSEHGEEGEPGEQGSTKASSPGSSSSMP LPSMLLERKMETLTTEWNKSPDMLFTIHPTDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR IPVAFPTGDANSLSKNILMYACTLTEGESAGAGEQGRMVQHISHSASASAGLGSPALAPP PTPRPGISPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHKFRYCGHRFHLNDQACH TVLPLLLTSSHHNALLTPPSAPGSLEGEQPPTFPLPKGLPSRKQLRNAATRTFHDPNAIY SELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACF VASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQ CGANTQLLHVFQEDFILGYKPQKEPEAYTPAFPSGEDYQPAPFSEKFFLVVIEKDLNRNS VLQMWHLHLKSVQACVDEPSPDYSFQSQLMVPNQVVNADSSPETSPIRPLPRSASTANLQ SASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVR FWRCAVEGDDGYSENEHDNRAYRWEPWALMNEEEDNNSAVCVSGRPVAVSCSYIGRLAVA FKQPRQGQLQGSGEDFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSN LFVYSRSDLYMSRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGMVNEQT SSKEGVAVITLPLGGSIKQGIRSRWILLRSVDLLSSVDGTPSLPVSLSWVRDGILVVGMD CEMHVYAQWHQDKKPGEGEEGNLSSADIAGGQTTCSSSVFEGRARSKSVFEGSAAVDEAL RAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVV RDVEAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALMLADLDT SYKGPEEAAKGGKVADGEGTQKSTEDQYADLFQVPTVTTDDFVNFATDKPEKKSRVINLS QYGPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDQQYTGG EALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPA MQRGDPQWSELRAVGVGWWIRNINTLRKMVEKLGKAAFQRHNDPLDAALFYLAMKKKAVL WGLFRSQHDEKMTQFFKNNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIE VLMEKMEDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRS IAYWIMKDYTRALDTLLERIPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLIIRRHFANP EGTATTVGLTAEKSSADEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSGSS PLSKASSKVNVNSTQPLENGTQGGVDWGSPAAPAWGGNDSVGGLDWSQPVVKVEEDELKL DWGEDKDDDDDDDDDDGLTMKKAEPGPDGGSESGGPKLQRADSQGESEVDVIAEQLKFRA CLKILMTELRTLATGFEVDGGKLRFQLYNWLEKEIAGMHKICNYKVEGKEEDSEGERWGE RTASVDISDEALEQTEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYCSL HGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSAFIAPTKTVIANPVL HLSNHIHDILHTISLMEAPPHPDIMDDRVNALHTLAASLSACVYQALCDSHSYSSQTEAN QFTGMVYQGLLLSERKRLRTESIEEHITPNSAPAQWPGVSSLISLLTSAREEDQPRLNVL LCEAVVAVYLALLIHGLGTHSSNELFRLAAHPLNNRMWAAVFGGGAKVIIKPKRPEAPPV APPQPPAEDVDRYRRRFNMRMLVPGRPVKETPATPPPVPTERPTYREKFIPPELSMWDYF VAKPFLPLSDSNALCDSDESGAEDDEDDDDAFLSDTQITEHSDPNSYSWALIRLVMVKLA HHNVKNFLPLTGLDFTDLPVTSPLSNAVLKTLENWEQLLLERMSKFDGPPPNYINTYPTD LSAGGGPAILRHKAMLEPDNTPFKTKNHQSFPARRLWHFLVKQEVLQETLIRYIFTKKRK QSESVENHMDRISPNCIAGASSPYKVEADLGYPGGKAKIIHKESDIIMAFAINKANSNEI VLASTHDVQEVDVSTLVAVQPYTWIGEDFDKESRSSDDIDHRSSHTNIAQASSVPFAPPQ MPVSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQ QLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHTKTCG DFAFITSSSLIATAGQSNDNRNVCLWDTLISPSNTMVHAFPCHENGATVLQYAPKQQLLI TGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNMKVWKLAGHGL MHSFSNEHAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSLVDVL NT seq 9183 nt NT seq  +upstreamnt  +downstreamnt atgcatctgcatcaggtgctgacgggagctgtaaaccctggagattgctgctattcggtg ggaagcgtgaatgacattcctttcacggcctatggctccggttgcgatgtagtgatcttg gctagtgactttgagtgtgtgcagattatccctggagctcagaatggaaatatacaggtg ggctgtgtggagtgctcccaccagcttggcaggattgctgcatcctacggaaacacagtc tgcatctttgaacctctttcctccaacccaaacaaacgccataagcagcttaactatcag tggcaaaagacaggacagttcttcctcgatgccatcacctacaacctggcctgggaccca caagggaaccgtatcctagcagcaactgagcggctccagctgtgggctcctccgctggca gatgccctgatagaggaggaggatgggcagatgactgaggataagccccaccctgtcctc aatgactggaactgtgtctggcagtgcaagactgctgcatctgttcacatcgccaagtgg tctcctgatggggagtactttgcaacagttgggaaggatgactgtttactcaaggtgtgg tatcccaccacgggctggcgttctgcggtggtggtccaggacctctcagataaaaagcct ctccctgttcacttctcctttgtttatctggcccatcctcgctcggtcactggtatgtcc tggaggaagaccagcaagtacatgcccaagggttcagtgtgcaatgtgttgctgacatcc tgcgaggatggtgtgtgtaggttgtggtcagaaaccctgctaccagaagacagcctgctt gggggacagatctctgagaacacacagtccttcagctcaagtctgccaggcctggcaggc aataaggacaagatccagcatgctttggagtcaatccaccacttgaagcatctgcgccgg ggccgacgacggtcctctgctctggtggcacacagtgacctgctgccctctcagctgggc acacaggacgcacacacccaccgccacatcgctcatcatgccaacgccctgtgtcacttc catatctcggccagtattaatcccaacacagatattccatcagtcctggctgactctgca gtgtttaacccagacgatggcactggtggcggaggtttcgtggttcactggctcaataat aaggaccttagcttcacttcttccatggacaactttatgctgcaactccgtaagttctct gaacagcagctggaccagactgctgaggacccactggaccctgaaggatcccctatgaag tttgactttgatctggatgacatgtctgacaaagcctcctcagagcacggtgaggagggt gagccaggggagcagggaagcaccaaagcatcctccccgggatccagctccagcatgcct ttgccctccatgctgctggagagaaagatggagactctgaccacagagtggaacaagagc ccagacatgttgttcaccatccaccccactgatggatctttcctggtttggcatgtgaag tacttggacgaattcaaccagggcatcttcagacaggttcaggtgtctttctcatcccgt attccagtggcatttcctacaggtgatgcaaactctctgagtaaaaacatcctgatgtac gcttgcactttgactgagggtgagagtgctggggcaggggagcaggggaggatggtccaa catatctcccactctgcttcagcctcggccggtctgggttcacccgccttggcaccccct cccacccctcgtcctggtatcagccctgctgtcatgatggtctccaagcatgttgatgga tctctcaaccagtgggcagtgacatttgctgagcgctctgccttctccaacgtattgacc gtatcgcacaagttccggtactgtggccaccgcttccatctgaatgaccaagcctgccac acagtgctgccactgctgctgacctcctctcaccataatgccctgctcacccctccctca gcccctggcagcctggaaggagagcagcctcctacgtttcccctaccaaaggggcttccc agcaggaagcagcttcgtaatgcagctacaaggacctttcatgaccccaacgccatctac agtgagctgatcttgtggagggtggatcacattggacccctctcctgcactggaggggtt tctgaactggctcgtatcaactctctgcacacttctgctttcagcaatgttgcttggcta cctacactagtacccagctctgttcttggaacttactgtaacagtgccagtgcttgcttt gtggcatcagatggtaaaaacctgcgtctctatcaagctgtggtggatgccagaaaacta ctggatgagctgtcagatcctgaaacatctaaactggtgggcgaagtgttcaacattgtc agccagcagtccactgccagacctggatgcatcatagagttggatgtcatcacaaaccag tgtggcgccaacacccagctactacatgtcttccaagaggacttcattctaggttacaag cctcagaaagaaccagaggcatacactccagcctttccgtctggtgaagattatcaacct gccccattctctgagaagttcttcctagtggtgatagaaaaggatctcaacaggaactct gtccttcagatgtggcacctgcacctcaagtctgtgcaggcttgtgttgatgagccgagc ccagattatagctttcagagccaactaatggttcccaatcaagttgttaacgccgactca tctcctgagacctctcctatcagacccctgccacggtcagcctctacagccaacctgcaa tcagccagcaaactcatcctcagctccaagctggtgtatagcaagcggcttgacctgccc cacggagtggaagttaccagggccaccccctctgcaggtcatcttagttcctcctccatc taccctgtgtgcctcgctccgtacctaattgttactacctgctctgactctcgcgtgcgg ttctggcgctgtgccgtggagggtgatgatgggtacagtgagaatgagcatgacaaccgg gcatatcgctgggagccttgggccctgatgaatgaggaggaagacaacaacagtgctgta tgtgtgtccggacggcctgtagctgtgtcctgctcctacatcggcaggctggctgtggcc tttaaacagccacgacaaggacagctgcagggttctggagaggatttctctatgcatgta tccatctatgagtgtgagtctactggtggctcagagtgggttttagagcaaactctccac ctggacgactttaccagaccctcgtcaaccctggatccaagagtcagtgtggactccaac ctctttgtctacagcaggtctgacctgtacatgagcagagaccatagctcccccaacatt aagcactatgttcatctggactggctgtcaaaggaggatggatctcacatcctcactgtg ggggttggatccaacattctcatgtacggccgcatctctggtatggtcaatgagcagact agcagcaaagagggggtggctgtcatcacccttcctctagggggcagtatcaaacagggg atccgctcacgctggatcctgcttcggtctgtggacctcctgtcctctgtggacggcaca ccgtctctgccggtctccctgtcctgggtgagagacggcatcctggtggttggtatggac tgtgaaatgcatgtgtatgcccagtggcatcaggacaagaagcctggtgagggagaggag ggcaacctgtcatctgcagacattgctgggggtcaaaccacatgttcctcctcagtcttt gaagggagagccaggtcaaagagtgtgtttgaagggagtgctgcagtggatgaggccctt cgtgccccagctggacttcaggaagggggactgtttgaggctgctcattccctgtccccg actctaccccagtaccatcccacccagctgctggaactcatggacctgggcaaggttcgc cgtgccaaggccatcctcgctcacctggtaaagtgtattgccggggaagttgctgtggtg agggatgtggaagcaggtgagggtggagccaggagacatctgtcccgaaccatcagtgtg actggcagcacagcaaaggacaccattgtggctggtcgtgacgggggcagggactacaca gagatcaactccatccctcccttgcccctttacgcgctcatgttggctgacttagacacc tcgtacaagggaccggaagaagctgctaagggaggcaaggtggccgacggtgaaggaacc cagaagtccacagaggaccagtatgctgaccttttccaggtgccaacagttaccacagat gactttgtgaattttgccaccgataaaccagagaagaagtctcgcgttatcaacctctct caatatggacctacatattttggaccagagcatgctcaggtattgtctagtcacctcatg cactccagcttaccagggctgacaagactagagcagatgttcttggtggccttggctgat acagttgcaaccaccagtgctgaggtcaccagctccactgatcaacagtacacaggtggc gaggctcttgatgagtgtgggctgaggtacctgctggccatgcgtcttcatacttgcctg ctcacctctctgccccctctctaccgcatgcagctgctccaccagggcctatcaacatgc cactttgcatgggcctttcactcagaggcggaagaggagctgctcaatatgattccagcc atgcagagaggcgacccacagtggtctgagctcagagctgttggagtgggctggtggata cgcaacattaacactctgcgaaaaatggtggagaagttaggtaaagctgctttccagaga cacaacgaccctttagatgctgctcttttctacttggccatgaagaagaaagctgtcctg tgggggctcttcaggtctcagcatgatgagaagatgactcagttcttcaagaacaacttc agtgaagaccgctggcgaaaggcagctctgaaaaatgctttctcactgctgggaaagcag cgctttgaacagtccgctgccttctttctactggcaggatcactcaaagacgccatagag gtgctgatggagaagatggaggatctccagttagccatgatagtagcaaggctgtatgag gctgactttgagaattcatccacttgccaaggcctcctttatgagaaggtcctcggctgt aacagggacggaagtggttatcactgttccagactgcaccctgacccattcctccgcagc atagcctactggatcatgaaggattacacccgagccctggacacactgttggagcgaatc cccaaagaggatgatgagaaccctgatgtgatggtgaaatcttgcaaccctgtggtgttt agtttctataactacctgcgaacgcaccctttgatcatccgtcgccactttgcaaatcca gagggcacagcaacaactgtgggcctcactgctgagaagagcagcgcagatgagatcaac cttatagaacgcaaactgttcttcactactgccaatgcacacttcaaggtgggctgccca gtccttgctctggaagtgctgtccaagattcccaaagttaccaagaaatctggctcctca cctctcagcaaagcatcatccaaggtcaacgtaaactcgacccaacccctggaaaatggc acccagggaggtgtggactggggctccccggcagcccccgcctggggaggaaatgatagt gtaggtgggttggactggagccagcctgtcgtcaaggttgaggaagatgagctgaagctg gactggggagaggacaaggatgatgatgatgatgatgatgatgatgatggtctgactatg aagaaagcagagccggggccagacgggggctcagagagtggtgggcccaaactgcagaga gcagactcacagggtgagtcagaggtggatgtgatagcagagcagctgaagttccgtgcc tgtctgaaaatcctgatgacagagctgcgtacgctggccacaggctttgaggtggatgga gggaagcttcgttttcagctgtacaattggctggagaaggaaatagcaggcatgcataag atctgcaactacaaggtggaggggaaggaggaagattcagagggggagcgctggggagag cgtacagcatcagtggacatatcagacgaggccctggagcaaacagaggccggggcctat gagcgtcatcagatggagcgccggcgtcttcaggccaagcagcagcactctgagaggcgc aaggcgtggctgaggaagaaccaggccctgctgagagtgtttctgtcctactgcagcctt cacggagccaaaggagggggagtcacctctgttcgcatggagcttctgttccttctgcag gagagccagcaggagaccacagtgaaacagctgcagtctcctctgcctctgcctactaca ctgcctctgctatcagcgttcatcgcccccaccaagacagtcatagcaaatcccgttctc cacctcagcaatcacattcacgacatcctccacaccatcagcctcatggaggccccgcca catcctgacatcatggatgatcgggtcaacgctctacacactctagcagcatctctgtct gcttgcgtctatcaagcgctatgtgacagccacagctacagcagccagacagaagccaac cagtttacagggatggtgtaccagggcttgttactcagtgagaggaaacgactccgcacg gaaagcattgaagaacatataactcccaactctgctcctgcacagtggccaggtgtgtcg tccctgatttctctgctgacgtctgccagggaggaggaccagccgaggctcaatgtgctg ctatgtgaagcggtcgtggctgtttatcttgcactgctcattcatggcttgggcactcac agcagcaatgaactcttccgcctagctgcacatcccctcaacaaccgcatgtgggccgct gtctttggaggaggggccaaagtcattattaagccaaagaggcctgaggccccaccagtg gctccccctcagcccccagcagaggacgtggaccgatacagacgtaggttcaacatgagg atgcttgttcccggacgccccgtaaaggagacgccagccaccccgcctcctgtgcccaca gaaagacccacatacagggagaagttcattcctccagagctgagcatgtgggactacttt gtggccaaacccttcctgccactgtcagacagcaacgctctgtgtgactcagacgaaagc ggtgcagaggatgatgaagacgatgacgatgccttcctttctgacacacagataacagag cactctgaccccaactcctacagctgggctctgatccgcctggtcatggtgaaactggct catcacaacgtcaagaacttcctccctctcactgggcttgacttcacagacctgccagtc acctcccctctcagcaacgctgtgctgaagactttagagaactgggagcagcttctgctg gagcgaatgagcaagtttgacggcccgcctcccaactacatcaacacttaccctactgac ctcagcgcaggaggtggccccgccatactccgacacaaggccatgctggagccagacaac acaccgttcaagacaaagaaccatcagtcctttccagcccgacgtctttggcatttcctg gtcaaacaggaagttcttcaggagactttgatccgttacatctttactaagaaaaggaag cagagtgagtctgtagagaaccatatggaccgtataagcccaaactgcatagcaggagct agcagtccctataaggtggaggcagatctggggtacccaggaggcaaagctaaaatcatc cacaaggagtctgatataatcatggcatttgccatcaataaggctaattccaacgagatc gtgttggcctccactcatgatgtccaggaggtcgacgtgtctactctagtggctgtccag ccgtacacctggataggggaggactttgataaagagtcccgaagctctgacgacatagac catcgctcttctcataccaacattgcccaggctagctctgtcccttttgcaccaccacag atgccggtctctgcatccatgccatggctcggcagcgggcagaccagcatgggggccagt gtgattatgaagaggaatctaaataatgtgaagagaatgacatctcaccccatatatcag tattacatgacaggggctcaggatggcagtgtgagaatgtttgaatggaacagacctcag cagcttatttgcttcagacaagcaggcaacgctagagtcactcggctctatttcaactcc caaggcaataagtgtggagtggctgatggagagggcttcctcagtctctggcaggtcaac cagacatcctccaaccccaaaccctacctgagttggcagtgccacactaagacctgtggt gattttgctttcatcacgtcctccagcctcatcgccacggctggacagtccaatgataac agaaatgtttgcctgtgggatactctgatttcacctagcaataccatggtccatgcgttc ccttgccatgagaacggggccactgtgctgcagtatgctcctaaacagcagctgctgatc actggaggcagaaagggctttgtgtgtgtgtttgacatccgccagaggcagctgctccac actttccaggcccatgactcagccatcaaggccctcgcactggatgccttcgaggacttc tttgtcactggctccgcagagggcaacatgaaggtgtggaagttagccggccacgggctc atgcactctttcagcaacgagcatgccaagcagtccatcttccgcaatatcggtgccggt gtcatgcaggtggaaacgcggcccggtaaccgcatcttcacctgtggagcagacggcacc ctgaagatgagggtcctacccgaccgctacaacatccccagcagcttggtcgacgtcctg taa

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