Lates calcarifer (barramundi perch): 108887921
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Entry
108887921 CDS
T04895
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108887921
04137 Mitophagy - animal
108887921
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108887921
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108887921
04121 Ubiquitin system [BR:
lcf04121
]
108887921
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108887921
Peptidases and inhibitors [BR:
lcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108887921
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
Others
108887921
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108887921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
CDC45
Rhodanese
Motif
Other DBs
NCBI-GeneID:
108887921
NCBI-ProteinID:
XP_018539138
UniProt:
A0AAJ7V7E3
LinkDB
All DBs
Position
LG2:7027514..7038597
Genome browser
AA seq
1086 aa
AA seq
DB search
MPAVSTGVKELYLSTSLGELNKKAEIKPDKTSTRSYVQSACKIFKAAEECRLDRDEEKAY
VLYMKYLTVYDIIKKRPDFKQQPEYYMTMLGPNSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEKERQEEKKRREEITEKASPKASSANKKDSKKVKGEQNELKNATSKAVVPAGGITAE
KLFHMMKDQTITLIVMDARSHGDFEESHIQVPAQTCISVPEEAISPGITVNQIETKLPEV
SKEHWRRRGFVDYIVLLDWFSSVPDLTLGTTLQSLKDALYKWDSITILRSEPLVLEGGYE
NWLLFYPMYTTNAKVRPPRQNIISTLPQLNFSYPSLEEPKPPTPPQPEPVVMSEPQEPSV
PVLMNGVTPADPPTSKTSLITDKLPDTVDSPVTVSTNSGVDLSKKNPAAGTSSQSPATAK
AFPQFDRAKKPSVWVSDEPKPSQNGSAKDSTQNGPVIPDRSVKPPFMPNTSLSKEEQSQI
HSEAVAVMEKARQEQEKRIQERRLEEERREKEQKEKEQKERLEREEHEKRKKEEEERGHQ
EKKKLERQKAEEEEDKENRAWEDKERRGKEQNTDTPSKSMSLDSPAPNHIVSEIKREPLT
RARSEEMGRSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVK
QKPPRPAEPDANREREREQSKLKRSYSSPDISQDLREEAQKKVTAPTTAVIPTINRETKP
ASAKVYSKVEIARPSAAKIRNLNPTFGGLGASLTGLRNLGNTCYMNSILQCLCNTPAMAD
YFNNNYYLEDINRYNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKITIGKINEQFAG
YDQQDSQELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADLAWSKHKLLNESIIV
ALFQGQFKSTVQCQTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEERLTDNNKV
FCRHCKAHRDSSKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDNLDLAQYVIG
PKHNLKRYSLYGVSNHYGGLDGGHYTAYCKNSHRQRWYKFDDHEVSEISTSSVKSSAAYI
LFYSTL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtgtccaccggggtcaaagagctgtatctgtccacatctctgggagaactc
aataaaaaggctgaaattaagccggataagacaagcaccagaagctatgttcagagtgcc
tgcaaaatctttaaggcggcagaggagtgtcgtctggacagagatgaggagaaggcttat
gtgctgtatatgaagtatttaacagtatatgacatcatcaagaaaagaccagacttcaaa
cagcaaccggagtattacatgaccatgcttgggccgaacagcttcaagaaagccattgaa
gaggctgagaagctctctgaaagtctaaaactcaggtatgaggaagttgaggtccggaaa
aaacttgaggagaaggagagacaagaggagaagaaaagaagggaggaaataacagagaaa
gcctctccaaaagcatcatcagcaaataagaaggacagcaaaaaggtaaaaggagagcag
aatgaactgaagaatgcaacctcaaaagctgtggtaccagctggtgggatcacagcagag
aaacttttccacatgatgaaggaccagacgattacactaattgtaatggatgcccgcagc
cacggggactttgaggagtcccacattcaggtcccagcccagacctgcatcagcgtgccg
gaggaagccattagcccaggaatcactgtgaatcagattgagacaaagctaccagaggtg
tcaaaagagcactggaggaggcggggatttgtggattatattgttctgctggactggttc
agttctgtccctgaccttacactgggcaccaccttgcagagcctcaaagatgccctctat
aagtgggacagcatcaccatcctacgtagtgagccgctggtcctggaggggggctatgag
aactggctgttgttttaccccatgtacacaaccaacgctaaagtccggccccctaggcag
aatatcatcagcaccctccctcagttgaacttcagctacccatccctagaggaaccaaag
cctccaaccccacctcaaccagagcccgtagtcatgtctgagcctcaggaaccctcagtt
cctgttctgatgaatggggtgacaccagcagacccccccacatctaaaacttccctgatt
actgacaagctgccagacactgttgattcccctgtcacagtttccacaaattctggtgta
gatcttagtaagaagaaccctgcagcaggaacatccagccagtcacctgcaacagcaaag
gccttcccacagtttgaccgtgccaagaaaccctctgtctgggtgtcagacgagcctaag
cccagccagaatggttcagcgaaggactccacccagaacggcccagttatccctgaccgc
tcagtcaaaccacccttcatgcccaacacctctttgtctaaagaagaacaaagtcagata
cactctgaggcagtggcagtgatggagaaggcaaggcaggagcaggaaaaacgcatccag
gagcgtcgtttggaggaggagaggcgggagaaggaacagaaggaaaaggagcagaaagaa
aggctagaaagagaggagcatgagaagagaaagaaggaagaagaggagagagggcatcag
gagaaaaagaaactagagaggcagaaggcagaagaagaggaagacaaagagaacagggcg
tgggaggacaaagagaggaggggaaaggagcagaacactgacacaccctcgaagagtatg
tctctggactcacctgctcccaaccatattgttagtgaaattaagagggagcccctgacc
agagcaaggagtgaggagatgggtaggagtgtaccaggccttccagatggctggatgaag
ttccttgacacagtgacggggacctacagatactaccattccccaaccaaccgtgtccac
ctgtaccctcctgaggtcactgttccacagaccccaccctccacaccgccaacagtcaaa
cagaagccaccacgaccagctgagccagatgccaaccgtgagcgagagcgggaacagtcc
aaactgaaacgctcctactcctcccccgatatcagccaggacctgagagaggaggcccag
aagaaggtcactgccccaaccactgctgtcatacccaccatcaacagagaaaccaaacca
gccagtgctaaagtctattctaaagtggagattgcgcggccctcagctgccaaaattcgc
aaccttaacccaacatttggaggtctgggtgcatcgctgactggccttcgtaacctggga
aacacatgctacatgaactccatcttgcagtgtttgtgtaacactcctgccatggctgat
tacttcaacaacaattactacctggaggacatcaacaggtacaacatccttggtcataaa
ggggaggtggcagaggagtttggtgttatcatgaaagccctgtgggccggtctgtacaag
tgcatcagtccgcgggacttcaagataaccattggcaagatcaacgagcagtttgctggc
tatgatcagcaagactcccaggagctgctgctgttcctcatggatgggctccatgaggac
ctcaacaaggcggacaacaggaagcggtacaaagaggaggaaaacgatcatctggatgat
cagacagcagccgacctggcctggagcaaacacaagctgctaaatgaatccatcattgta
gcgctgttccagggccagttcaaatccactgtgcagtgtcagacctgccatcgcaagtcg
cggacatttgagacctttatgtatctgtcgctgcccctggcctccaccagcaagtgctcc
ctccaggattgtctgaggctgttctccaaggaagaaaggctgactgacaacaacaaggtg
ttctgcagacactgcaaggcccatagagactcctccaagaaactggagatctggaaagtc
ccacccattctcctggtgcacttaaaacgattctcctatgagggcagatggaagcagaag
ctgcagacgtctgtagacttccctctagacaatctggacctggcccagtatgtcattgga
cccaaacataacctgaagagatacagcctttatggtgtttctaaccactacggaggttta
gatggtggccattatacagcctactgtaagaacagccacagacagcgctggtacaagttt
gatgaccatgaggtgtctgaaatctccacctcctccgtcaagtcctccgcagcctacatc
ctgttttactccaccctgtaa
DBGET
integrated database retrieval system
