Lates calcarifer (barramundi perch): 108887950
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Entry
108887950 CDS
T04895
Name
(RefSeq) vascular endothelial growth factor D isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108887950
04020 Calcium signaling pathway
108887950
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108887950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108887950
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Growth factors (RTK binding)
108887950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
108887950
NCBI-ProteinID:
XP_018539196
UniProt:
A0AAJ7PUQ8
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All DBs
Position
LG2:complement(6642782..6650318)
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AA seq
315 aa
AA seq
DB search
MMMKMKQTLCRLSFLVTLVVEMSWINVGHSMHTEGGRRASMVMKQWERKVRSASSLDELL
RLTDFPDWKLWKCRLRLQQPETQTETLSSPPSVGSHRSTRYAAESYSLEILKAIDEEWQR
TQCMPRETCVDVAKELGTDPSMFFKPPCVSIHRCSGCCNQEGVTCRNTTTVYVNKTVLSV
IPFKFVPEPVLIKIANHTECRCMEPAIIRRNAQPHRSSGCSLMGQLSEAEDSRRLCASGL
IWDCSSDRCIPYPSSIPEFPLSSWMPDCEIDVERCDCLPRPVPTLQPRGCQLNSSTCAHR
HQHFDQASCSCKRPK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaagatgaaacagaccctgtgcagactctctttcttggtgacactggtggtg
gagatgagctggataaatgtgggccacagcatgcacacggagggaggaagaagggcaagt
atggtaatgaagcagtgggaaaggaaagtacggtcagcctccagcctggatgagttgctg
agactcacagactttcctgactggaagttgtggaagtgtcgcctgagactgcagcagcca
gagacccagacagagaccctctcctctccaccctcagtggggtcgcaccgctctacacgt
tacgctgcagaatcttacagcctggagattcttaaagccatagatgaagagtggcagcgg
actcagtgcatgccaagggaaacatgcgtcgacgtggccaaggagttaggcactgacccc
tccatgttcttcaagcctccttgtgtgtccatccacagatgcagtggttgctgcaatcaa
gagggtgtcacctgcagaaacacaactactgtatatgtgaataaaactgtccttagtgtc
attccattcaagtttgtaccagaacccgtgctaataaaaatagctaatcatacagagtgt
aggtgcatggagcccgccataatacgacgtaatgctcaacctcacaggagcagtggctgc
tctctgatgggccagctgtcagaggcagaggactccaggagactgtgtgccagtgggttg
atttgggattgttccagtgacagatgtataccttacccttccagtataccagagtttcct
ctcagttcatggatgcccgactgtgagatagatgtggagcgatgtgattgtcttcctaga
cctgtgccaactctgcagccaagaggctgccaactcaactcttccacctgtgcccacagg
catcaacatttcgatcaagcctcctgcagttgcaaacggcccaagtag
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