Lates calcarifer (barramundi perch): 108887994
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Entry
108887994 CDS
T04895
Name
(RefSeq) tudor domain-containing protein 3 isoform X1
KO
K18404
tudor domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108887994
03036 Chromosome and associated proteins [BR:
lcf03036
]
108887994
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108887994
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
108887994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_N_C
SMN_Tudor
TUDOR
UBA
SGF29_Tudor
UBA_4
Motif
Other DBs
NCBI-GeneID:
108887994
NCBI-ProteinID:
XP_018539281
UniProt:
A0A4W6D1N0
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Position
LG2:5432837..5445843
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AA seq
785 aa
AA seq
DB search
MTDLTETLTKEGWYLSDEGIAELKGSAEKITHSDIIRIALDSDLRSTGRKFLPSDVNSGR
TEKLEGPCVLQVQKVRNISAPKDHEESHGAPRMLRLQMTDGHTTCVGLEYKHLSKISLNT
PPGTKVKLLGTVQVKNGLLLLDDSKISVLGGEVDHMVEKWELQRSLAKHSRSNIGAEGGP
PPFVPFGQKCARKDEVDGRELDQRKTLQTHNVVKSPDENDEFEKQRTAAIAEVAKTKEGP
RTFGGGGNAGSNLSSTASSSRGRDSYQQRRREDRVERTESRQDGNYRELVDERALRDIME
MGFNKEAARQALMDNNNNLEVALNSLLTGSSGSRPGPVVAESNKPQPRARGRGRGRSRND
DEEEGGGGRPSGPSTLFDFLESKMGVFSIDEPKSQASQRHHESKVNFSNSDSKDTPQSKF
SSHYEHRQQRNDRPPRFHRDTDFPKPGQEPLPNSTTSQTSAQAQQWKNQERWSRGTSDKL
HNDRREMRDEQIFPSSFTTTFTRSKEPQQQMEFSGSYHQRSRNGDGGGGNIAGPSHRRGA
KDNVPTSKLTISAASEVDGRGNTKCTDRTEQPNNSRRKGKPDRPTSDHFDRQRDGGPPNF
NSRGGSSGMSQEVGLTSRIMTGEPCHFQNGDMEHKRTGPIKPTNSSCPPNREPPPKKTTY
NNSGPKRRSGQGRGQGPRGPEKSHTMEHAWKPGDQCLALYWEDSKFYHARIDAVHPSGST
AVVVFSDYGNCEEVLLHNIKPVAADVLEEDDGYYDSSLEFRRGGDGQPRRTRPTQQYYQP
PRARD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttgacagaaaccctgacgaaagagggctggtacctcagtgatgaaggcata
gcagaactgaaaggatctgcagagaagataacacacagtgacattattcgtattgcactt
gatagtgatcttaggtctactggaaggaaatttctaccgtctgatgtcaatagtggaaga
actgagaagttggagggtccatgtgttctccaggtgcagaaggtgaggaacatctcagct
cctaaagaccatgaggagtctcacggtgcaccacgaatgctgcgcctgcaaatgacagat
gggcataccacctgtgttggattggagtataaacacctgtctaagatcagtcttaatact
ccccctggaacaaaggtaaagctccttggtacagtccaggttaaaaatggtcttttgctg
cttgatgactcaaaaatctctgtccttggaggagaggttgatcacatggtagagaaatgg
gaactacaaaggagtctggccaaacacagcaggagtaacattggagcagaaggtggacct
cctccctttgtgccatttggtcagaaatgtgcaaggaaagatgaagtagatggcagagaa
ctcgaccagaggaagaccctgcagactcacaatgtggtcaaaagtcctgacgagaatgat
gagtttgaaaagcagcggacagcagctattgctgaggtggccaagaccaaagagggtccc
cgcacatttggaggtggaggaaatgcaggcagtaatttatccagcactgcttcctcctcc
cggggcagagactcataccagcagaggaggcgagaagacagggttgaaagaactgaaagc
aggcaagatggaaactacagagagctggtggatgaacgtgctctgagagacatcatggag
atgggctttaacaaagaggctgctcggcaggctctaatggacaataacaacaaccttgaa
gtggcactgaacagcctactgactggttcttctggtagcagacctggccctgtggtagct
gaatctaacaagccccaacccagagccagaggaagaggaagaggcaggtccagaaatgac
gatgaggaggagggaggagggggaaggccatctggaccaagcactctgtttgactttctg
gaatctaaaatgggtgttttctccattgatgagccaaagagccaggcatctcagagacat
catgagagtaaagtgaatttctccaactctgactccaaagacacacctcagtccaagttc
tcctcacattatgaacataggcaacaaaggaatgacagaccacctcggttccacagggac
actgattttcccaaacctggccaggagcctctccctaatagtacaacatcccagacatca
gctcaagcccagcagtggaagaatcaggagagatggtcacgaggcacatcagacaaattg
cataatgacaggcgagagatgcgagatgagcagatttttccttcctccttcactactact
ttcacacgttcaaaagaacctcagcagcagatggagtttagtggctcttaccaccagcga
tccagaaatggagatggtggtggcgggaacattgctggaccatctcacaggagaggggcg
aaagacaatgtacccacatctaaacttacaatttcagcagccagcgaggtggatggaaga
ggaaatactaagtgtacagacagaactgaacaacccaacaacagcaggagaaaggggaag
cctgaccgaccaacctcggatcactttgaccgacaaagggatggtgggccaccaaacttt
aactcgaggggaggaagctcagggatgtcccaagaagtggggttaacatctcgaatcatg
acaggagagccctgtcatttccagaatggagatatggaacacaaaagaactgggccaatc
aagccaacaaactcatcttgtccccccaacagggagcctccccccaagaaaaccacttat
aataactcaggacctaaaagaaggtcaggacaaggcagaggtcaaggtcctcgaggacca
gagaagagtcataccatggaacatgcttggaaacctggtgaccagtgcctggcactgtac
tgggaagacagcaagttctaccatgccagaatagatgctgtgcatccatcaggctccacg
gctgtggttgtatttagtgattatgggaactgcgaagaggtcctgctgcataacatcaaa
cctgttgctgctgatgtattggaagaagatgatggttactacgacagttctctagagttt
cgccgtgggggagatggacagcctagacgaacgagacccacacagcagtattaccagcca
cccagggcacgagattga
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