Lates calcarifer (barramundi perch): 108888004
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Entry
108888004 CDS
T04895
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10269
F-box and leucine-rich repeat protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108888004
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108888004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
PRANC
F-box_5
DUF4116
Motif
Other DBs
NCBI-GeneID:
108888004
NCBI-ProteinID:
XP_018539303
UniProt:
A0A4W6D6H6
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Position
LG2:4838511..4846788
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AA seq
434 aa
AA seq
DB search
MKRVLQGNEQEDGGGTSAGSQETLKRPCKQRRENDLEEEGTRWECLPQEILLHIFQYLPL
LDRAYASQVCRGWNQAFHMPELWRCFEFELNQPASSYLKATHPDLIKQIIKRHSNHLQYV
SFKVDSSRESAEAACDILSQLVNCSLKTLGLISTARPSFMELPKSHFISALTVVFVNSKS
LSSLKIDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNY
HLLSDELLIALSSEKHVHLEHLRIDVVSENPGQQFHTIKKSSWDAMVRHSPKFNLVMYFF
LYEDEFGPFFRDEIPVTHLYFGRSVSKDVLGRVGLTCPRLVELVVCANGLRPLDEELIRI
AQRCTQLSAIGLGECEVSCSAFVEFVKMCGDRLTQLSIMEEVLVPDHRYGLDDIHWEVSK
HLGRVWFPDMMPTW
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagttctccaagggaatgagcaggaggacgggggtggcaccagtgccgggtct
caggagactcttaaacggccctgcaagcaaaggagggagaacgatttggaggaggagggc
acccgctgggagtgtctgcctcaggagatcctgctccacatcttccagtacctgcctcta
ctggacagggcttacgcttctcaggtgtgtcgaggctggaaccaggcttttcacatgcca
gagctgtggcggtgctttgagttcgagttaaaccagccggccagctcctacctgaaggcc
acacacccagacctcatcaagcagataatcaaaaggcactccaaccacctgcagtatgtc
agcttcaaggtggacagcagcagagagtccgcagaggcagcgtgtgacatcctctctcag
ctcgtgaattgttctttgaaaacactggggctcatctccacagccaggcccagtttcatg
gagctgcccaaatctcacttcatctcagcgctgacagtggtttttgtcaactccaaatcc
ctgtcctccctgaagattgacgacacgccagtggacgacccctccctcaaagtcctggtg
gccaataacagtgacacactcaaactgctgaaaatgagcagttgccctcacgtttcacct
gcaggtatcctatgtgtggctgatcagtgccacggcctgagagaactggctctcaactac
catttgctgagtgacgaacttctcattgccctgtcctcggagaagcacgttcaccttgag
cacctacgcattgacgtggttagcgaaaaccccggccagcagttccacaccatcaagaag
agcagctgggacgccatggtacgccactctcccaaattcaatctggtcatgtatttcttc
ctctacgaggacgagtttggccccttcttccgcgatgaaatccccgtcacgcacttgtac
tttggccgttccgtcagcaaagacgtgctaggccgcgtcgggctcacctgcccgcgtctg
gtcgagctggtggtgtgcgccaacgggctgcggccgctggatgaggagctgatccgcatc
gcccaacgctgcacgcagctgtctgccatcggcttgggagagtgcgaagtgtcctgcagc
gcctttgtggagtttgtcaagatgtgcggggacagactgacgcagctatccatcatggag
gaagtactggtcccagatcaccgctatgggctggatgatatccactgggaggtgtcaaag
catttgggtcgtgtctggttcccagacatgatgccaacctggtag
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