KEGG   Lates calcarifer (barramundi perch): 108888020
Entry
108888020         CDS       T04895                                 
Name
(RefSeq) DNA excision repair protein ERCC-5
  KO
K10846  DNA excision repair protein ERCC-5
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108888020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108888020
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108888020
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 108888020
NCBI-ProteinID: XP_018539337
UniProt: A0A4W6D9U5
LinkDB
Position
LG2:4636543..4644229
AA seq 1138 aa
MGVHGLWRLLESTGKPINPETLEGKILAIDISIWLNQAVKGVRDRDGNSVQNTHLLTLFH
RICKLLFFRIRPVFVFDGDAPLLKKQTLALRRQRKEELSQESQQTNEKLLKTFLKRQAIK
AALGGRSQDPLPSLSSMTRNEVDDMYVLPALPPAEEKDESRSEAWESSEEEEETEMGSHD
MYQEDFYEDPNSVDINSEEFASLPPEMKHEILKDMKEFSKRRRTMFHKPPQHSGDFSQYQ
LAGLLQRNQLNQRLEGVEKEMSQRSAGGAPQVYQQDGDQQSHNVESNRLVSEDHSHYILI
KGSTKTKTAPESQPAAAPWSGSSLSGCKRRAADRPEPLWRPVCEGEEEAPGSKPSASNPP
RGDTSPPSPRTLKAISAAMSAGSDEERAEREEKDGSVSPRTLLAIQQALAEEEDGVAERR
TVICGSSSELQANIHHPEPQVVISSSEEETEPDDVKPLANEKSDFKGNSTGRSLHVKDSL
LASSSEDEMEEVIGQRNKALHLAVLQQPHEREMSELTGDIRTGSRGQTEKQEELERKESE
HGLITKNRDQVQPQGAAVSSQNTLSTNLSAQLFGGSAAPEIHPVLSEQRRDKTTEALQER
NRDDVKTEGSEGSESEESFIEVSEDELKEEDTDDSSVMMRERGSPAEVHENRTDTEEKPE
ESLTEAPAAALKSEEEEDKDIQNEESELKEGTETESSSTPAVNEWEHLGVDELEALESSL
QVEQSNLREQKQQQERMANTVTGQMYLESQELLRLFGVPFLVAPTEAEAQCAALDRADHT
HGTITDDSDVWLFGGRHVYKNFFNQNKYVEHYQYSDLQNQLGLDRTKLINLAYLLGSDYT
EGVPGVGYVTGMEILNEFPGPGLEPLTQFSKWWSEAQEKKRLTADPRDTKVKKKLRDLKL
QPGFPNPAVAQAYLHPAVDQSDGSFSWGRPQLDMIKEFCLSRFGWSSRKTEETLQPVIKQ
LNTQQTQLRIDSFFRMEQQEKQAIRSQRLRRAVTCLKRKEKEGGEEDSEEETHSPVKPKR
GKAGSKNPKKGGGEEKEEEMSAAGGGFLGSEVIFESPLTSLKDVSGTSQESLSGQTVPQS
TKTLPQRVRSSSSSSSGEDSDGGGEVAMVTARSVFEGSRRGGRGKSTRGRGRGRGKKP
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgggagtacacggactgtggaggctgctggagagcacagggaaacccatcaaccctgag
acactcgagggaaagatccttgctattgacatcagcatttggctgaaccaggctgtgaag
ggggtgagggaccgtgatggcaacagtgtccagaacactcacctcctcacgctcttccac
cgcatctgtaagctgctcttcttccgcatccgtccagtctttgtgtttgacggtgacgcg
ccactgctgaagaagcagactctggctctgaggaggcagaggaaggaggagttgagccaa
gagtcccaacagaccaacgagaaactcctcaagacgttcctgaagagacaagctatcaaa
gcagcactcggaggccgcagtcaggatcctctacccagcctctccagcatgacgagaaat
gaggtggacgacatgtatgttctaccagccctccctcctgcagaggagaaggacgagagc
agatcagaggcctgggaaagttcagaggaggaggaagagacagagatgggcagtcatgac
atgtatcaggaagatttttatgaagaccccaactcagtggacatcaactctgaggagttt
gccagcctgcctcctgaaatgaaacacgagatactcaaagacatgaaagagttttccaaa
agacgccgtaccatgttccacaaacctccacagcactcaggagacttttcccagtaccag
ttggccggcctgctgcagaggaaccagctgaaccagcgcttggagggggtagagaaagag
atgagccagaggagcgccggcggtgctccacaggtctaccagcaggacggggatcagcag
agtcacaacgtggagtccaatcgactggtgtcagaagaccattcccactacatccttatt
aaaggctccacaaagactaaaactgcacctgaaagccaacctgcagctgcgccctggtcc
ggcagctccctgtcaggctgcaaaagacgagcagcggacagacccgagcccctgtggcgt
cccgtttgtgagggagaggaggaagcaccaggctccaaaccctcagcatcaaatccgcct
cggggagacacatcaccgccctcccctcgtacgctcaaggcaatcagtgctgcgatgagc
gctggctcagatgaggagagggcagagcgggaggagaaggatggtagcgtgtccccacgt
acactgttggcaatccagcaggctctggctgaggaggaggacggtgtagctgaacgcagg
actgtaatctgtggttcgtcctctgaactgcaggcaaatattcatcatcctgagccgcaa
gtggtcatcagcagctctgaggaagagacagaacctgatgatgtgaagcctttagctaat
gaaaaatcagattttaaggggaactcaacaggccgaagtctgcatgtgaaagacagtctg
cttgctagcagttctgaggatgagatggaggaagtgattggacagagaaataaagctctt
caccttgcagtgctgcaacaacctcatgagagagagatgtcagagttgacaggggatata
aggacaggaagtagaggtcagacagagaaacaagaagagctggagagaaaagaatcggag
cacgggctgatcacaaagaacagggatcaggttcagccacagggtgcagctgtttccagt
caaaacacattatccaccaatctctctgctcagctatttggtggcagtgcagcacctgaa
attcaccctgttctgtcagagcagaggagagacaagactactgaagctctgcaggaaagg
aacagagatgatgttaagacagagggaagcgagggaagcgagtcagaagaaagtttcatc
gaggtctcagaggatgaattaaaagaggaggacacagatgattcatctgtgatgatgaga
gagagaggatctccagctgaagtccatgaaaacaggaccgacacagaagaaaaaccagaa
gaaagtctgactgaggctccagctgctgctttaaaatcagaggaagaagaggacaaagac
atacagaatgaagagagcgagctgaaggaaggaacagagacagagtcaagctcaactcca
gcagtcaatgaatgggaacacttgggtgtggatgagctggaggctctggagagctctcta
caggtggagcagagcaacctgagggagcagaaacagcagcaggagaggatggcgaacaca
gtcaccggacagatgtacctggagagtcaggagctgctgcggctgtttggcgtaccgttc
cttgtggccccgacggaggccgaggctcagtgcgcggcgctcgaccgcgctgaccacact
catgggaccatcacagacgactcagacgtgtggctgtttggagggcgacatgtatacaaa
aacttcttcaaccagaacaaatatgtagaacactaccagtacagtgacctgcagaaccaa
ctgggtctggacaggactaaactgataaatctggcttacctgcttggaagtgactacaca
gagggcgtgccaggggtgggatatgtgactggcatggagatactgaatgagttcccaggg
ccggggttggagccactaacacagttcagtaaatggtggtcagaggctcaggagaaaaag
cgtctgacggctgatcctcgggacacgaaggtgaagaagaaactcagggacctgaaactg
cagcctgggttccccaacccagcggtggctcaggcttacctgcatcctgctgtggaccag
tcagacggctccttcagctgggggcgcccacaactcgacatgatcaaagagttctgcctg
agtcgcttcggatggagcagtcggaagacggaggagactcttcagcctgtgatcaagcag
ctcaacacccagcagactcagctccggatcgactcattcttccgcatggagcaacaggaa
aagcaggcgatccgcagccagcgactccgccgagcggtcacctgcctgaagagaaaggag
aaagagggaggagaggaggacagcgaggaggaaacgcactccccagtcaaacctaagaga
gggaaggcagggagcaagaacccgaagaaaggaggaggagaggagaaagaggaggagatg
tctgcagcgggaggagggtttctggggtcagaggtgatcttcgagtctccgcttacatct
ctcaaggatgtgagcggcaccagccaggagtcactctcaggacagactgtccctcagtct
acaaagactctacctcagagggtcaggagcagcagcagcagcagctctggcgaggacagc
gacggtggcggtgaagtcgccatggttacagcccgttctgtcttcgaaggcagccgacga
ggcggcagagggaagagcacaagagggagagggagaggaagggggaagaagccatga

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