Lates calcarifer (barramundi perch): 108888075
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Entry
108888075 CDS
T04895
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
Ig_2
ig
LRR_4
LRR_5
LRR_1
V-set
C2-set_2
LRR_9
LRR_14
LRR_6
C2-set_3
C1-set
LRRCT
LRRNT
Motif
Other DBs
NCBI-GeneID:
108888075
NCBI-ProteinID:
XP_018539388
UniProt:
A0A4W6D5T6
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All DBs
Position
LG12:complement(6498250..6513762)
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AA seq
1063 aa
AA seq
DB search
MAESWPILSALVFILFGLSAWASESCPAPCSCSEGQGEVRVLDCNRRRLSAPPLDTPDGI
TQVTMNHNELAALPFLGDGSSNITSLSLVHNRITELSMHQLQPYVSLETLDLTSNSISEL
KVGSFPYMQLKYLNLSNNKISVLEPGCFENISSSLLVLRLNRNRLAVLPSKVFRLPQLQF
LEMKRNKIKVVDSLTFKGMDSLKSLKMQRNGITKLMDGAFFGLNSIEELELEHNNLTEVN
KGWLYGLRMLRILRVSQNTVGIIRPDAWEFCQKLEELDLSFNHLTRLEETAFVGLGFLES
LNLGENSISHLGEGVFSGLASLRTLDIRNNEISWAIEDSIGVFDGMKKLNTLILQRNKIK
SITKKAFEGLEELEHLDLSKNGIMSIHPEALSHMKLKVFVLNTSSLLCDCHMQWLGPWLT
DSPLQQSVSAVCAHPASLLGRNVLSISPEEFVCDDFPKPQITTHPETSVALRGNNVTLSC
VASSSSDSPMTTAWRKDGEVLYDAEVQNYARYQEGELIYTTMLHLLNVNFTDEGRYQCVV
SNHFGSNYSNRAKLTVNELPSFLKTPMDLTIRTGTMARLECAAEGHPSPQIAWQKDGGTD
FPAARERRMHVMPDDDIFFIANVKTEDMGVYSCTAQNAAGSLSANATLTVLETPSFMRPL
EDRTVARGETAVLQCIAGGSPAPRLNWTKDDGPLVLTERHFFAAANQLLIIVDAGPADAG
KYTCIMSNTLGTERGHIYLSVSPSPNCDTGAGYDQDGWTTVGIVVIVVVCCVVGTSLVWV
IVIYHMRRKSEDYSITNTDEMNLPADIPSYLSSQGTLSEPQEGYSNSEAGSHQQLMPPLS
NGYIHKGSDGVCYGDTGSEVETEGNGMLHCRVGSLFTGRSSFHPGEPREGLAGVPTGGAG
PLVICSDCYDNANIYSRTREYCPYAFLGEDDPLDRTLPGLKESFSSHAQHEDRALESLIS
NQDSSVFLTSHDKRLSSHTPPEHYTNDSINRSFWGEGEDLSSKPQPGASQHPVTVHRTPP
LPSSVDGAEEQSEAEVDCFPNQCTQDHRSASNRTNPQEHPAPT
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagttggcccattctttcggccctcgtcttcatactattcggtcttagtgcc
tgggcctctgagtcttgccctgctccttgctcgtgttcagaaggacaaggtgaggtccgt
gttctggactgcaacaggagaagactgtcagcacctcccctggacacaccagatgggata
acccaagtcaccatgaatcacaatgagctggctgctcttccttttctaggagatggttcc
tcaaacattacctcactatcattagtccacaatcggatcacagaactgtcaatgcatcag
ctgcagccatatgtttccttggagacgctggacctgacatccaattccatatctgagctc
aaagttggatccttcccctacatgcagctgaaatatctgaatttgagtaataacaagatc
agtgtcctcgagcctggctgctttgaaaacatctccagctccctgctggtgctgaggctg
aacaggaacagattagctgtgctgccatccaaagtcttcagacttcctcagcttcagttc
cttgaaatgaagcgtaacaagattaaggtagtggacagcctaacattcaaagggatggac
tcactgaaatcattgaagatgcagaggaatggcatcactaagctcatggatggagccttt
tttgggcttaacagcattgaagaactagagttggagcacaacaacttaactgaggtcaat
aaaggctggctgtatggcctgcgcatgctgcgtatcctgcgggtcagccagaatactgtc
ggcatcattcgaccagacgcctgggagttttgccaaaagctggaggaactagacttgtcc
ttcaatcatttgactagacttgaggagacagctttcgtaggattaggtttcttggagagc
ctgaacctgggagagaactccatcagccatttgggagaaggagtattcagtggccttgca
agtctgcgcaccctagatatccgcaacaatgaaatctcttgggccattgaagactccatt
ggtgtattcgatggaatgaagaagctgaacacactaatcctacagcggaacaaaataaaa
tcaatcactaagaaagcgtttgaaggcctggaggagctggagcacctggacctcagcaag
aatggcatcatgtcaatacaccccgaggcgttgtcccatatgaagctcaaagtgtttgtc
ctgaacacaagcagcttgctgtgtgactgtcacatgcagtggttggggccttggctgact
gacagtccgttgcagcagtctgtctctgctgtctgtgctcatcctgcgagtctgcttggt
cgcaacgtcctgtccatcagtcctgaagagtttgtttgtgatgatttccccaaacctcag
atcacaactcacccagagacatctgtggcactgcgggggaacaatgtgactctgagctgt
gttgcctctagcagcagcgattcgccaatgaccacagcttggcggaaggatggggaggtg
ctgtatgatgcagaagtgcaaaactatgcccggtaccaggagggagaactgatctacacc
actatgcttcacctcctcaatgtcaactttactgatgaggggcgctaccagtgtgtggtc
tccaatcactttggctccaactactccaacagggccaaacttacagtcaatgagctgcca
tcctttcttaagactcccatggatttgacgatccggactgggactatggccaggctggag
tgtgctgctgaaggccatccatcaccccagattgcttggcagaaggatggaggcactgac
tttcctgctgcccgagaacgaaggatgcacgtgatgccggatgatgacatcttcttcatt
gctaacgtgaagactgaagacatgggggtgtacagctgcacggctcaaaatgcagctggc
agcctgtcggcaaatgctactcttactgtcctggaaactccatccttcatgcggccactg
gaagacagaacagtggcccgtggtgaaactgctgtgcttcagtgtatagctggaggcagc
ccagccccccgtctcaactggaccaaagatgacggacctctggtcctcacagagcgccac
ttctttgctgccgccaaccagcttcttatcatagtagatgcaggtcctgctgatgctggg
aaatacacctgcatcatgtctaatactctgggaacagagcgtggccacatctacctcagc
gtctcaccatcaccaaactgcgatacgggtgcagggtatgaccaggacggctggaccact
gtgggcattgtggtgattgtggtggtgtgctgtgtggttggaacctcactggtctgggtc
attgtcatctatcacatgcgcagaaagagcgaggactacagtatcacaaacacagatgag
atgaatttaccagcagacatccccagctacctgtcctctcagggcacattgtcagagcct
caggaaggctacagtaattctgaggctggcagccaccagcagctcatgccccctctctcc
aatggatacatccataaggggtcagatggtgtgtgttatggagacacgggcagtgaggtg
gaaactgaggggaatggcatgctgcactgcagggttggctctctgttcactggccgtagc
agcttccaccctggggagcctcgtgagggactagctggagtccccacaggtggtgcaggt
ccgctggtcatctgctcagactgctatgacaatgccaacatttactctcgcacacgggag
tactgcccctacgcctttctgggggaggatgacccgctggacagaactctaccaggcctg
aaggagagcttcagttcgcatgcccagcatgaggacagggccctggagagcctcattagc
aaccaggactcctctgtctttctcacctcacatgacaagaggttgagcagccacactccc
ccagagcactacactaatgattccattaacagatcattctggggagaaggggaagatctg
tcttcaaaaccccaaccaggagcatcccagcacccagtgactgttcacaggacacctcct
ctgccttcctctgtagacggggcagaggaacagagtgaagcagaggtggactgcttcccc
aaccaatgcacacaggaccacagaagtgcctctaataggactaaccctcaggagcatcct
gcacccacatag
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