Lates calcarifer (barramundi perch): 108888118
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Entry
108888118 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein dispatched homolog 2
KO
K24681
protein dispatched 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108888118
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
Patched domain-containing proteins
108888118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
108888118
NCBI-ProteinID:
XP_018539462
LinkDB
All DBs
Position
LG19:12218019..12230931
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AA seq
1495 aa
AA seq
DB search
MDACSIIGESTDAIVMDDSPTDEREIQEACQSEIPAVSLCPPDSECSAEAPLTVIQCEGE
LCDSCSSLGRPSSSCQLYHQVPQGPRTSAYDSPQPRKCPHCSHHGPNKLSSCHDCHSNTT
GSHAEGGAVVKVGHGCSSRHQTSRHSAVRCHWLHGSNESGAQKPTQRHVVTVRDGGLYCI
LRNYSQVIVDYPLAVLVGCAVLLLGCSLAGLFIGPLPDFSDPLLGFEPRGTYIGVRQSSL
SQLQENTGPGKTLSPLPQQLSKSFGDAVNGDSGGSQGTSRLRIKRMLARDSSPDTFLCDA
PGERLAQLVFRSENSASLWSLKAIHAMCEMEQSRIRSQAQFQDLCQQHVRMEAEGTSRSG
CCPSWSLGNYLAVLTNASCCLSLTSHQVSESLNLLRKCALYYHEGHLVEACVDRPKHGSC
SSVPSRCKQSRVVFQILHFLVDKDFLGPQTVEYQIPTLKYSLLFLPVDKGEHMMEIYMNS
LEGRDLTYNNTTITGMDFGIKQTLFKHYLARDSVYPVLAVVCLLFTMALYLHSLFIVALS
VITITGSLLTSYFFYKVAFRLTFFPLVNLSAALILLGSCSNQVFIFADFWNLQLSQNPSA
SLEKRVHRALQEVGYLILASGLTSSAAFFSGYLSSITAIRCFSVYLGTASLISSLLALVW
LPCSFVLRERYTEASSASQAAQGWKPCCSKNTGGFWDTSSRKKCLFALGQKLRELKRGLT
DTSNLLFLKILPCGVVKFRYIWVCWFAVLAAGGTYMSCVDPGMKLPSLDSKVTQLFRSSH
PFERYDAEYRHMFMFERQRNGEDKPVTLMLVWGVKPSDNGDHFDPKSNGSLVLDPTFNMS
QPDAQVWLRDICGRVQNQSFYSPPPPEDRNVMTDNICLVEQLIHWVSVRRCSESDDALHF
CCNDIPFPYPPSVFENCLSMMLAERYTEGHLAHSGGLYFQPDGRVAALVLAFKTTYLYSF
NFSRTSVFYREILTWFNREISGAPQGLENGWFISQLSLFDLQQSLSSETLVVAGFSVALT
FILLLLTTWNIPLSIYGTIAVGGSVFVTVGLLVLLEWQLSGIEALFISSAAGLSVDFIAN
YCISYSLAPHSDKIGKVAHSTKRMGCPVAIVSGAFFSMGIIMLPATALLFRKLGIFLFLV
KCVACGFATFFFQSLCCFFGPQKNCGKITLPCFSDQTDGVLSSCSAAEPGSSSAANGAFG
RSRVRRSYDKEAGGYLYPNHRQHRQKQTGGGGGGGGRGPEQYELQPLAYRLSDSFENSTC
TSKLSNRPSVLSDEIEYCGEDVGGNSVNGESEEMCGRQHKICQPPPALQTSSPYKENTLR
PVGLAQEDFAKDKLLCKTCRGQSGGVKHWANTSFSSSSSIQETITSHTLETTDQPSLCKE
DHAAEECLHSHKGHRFSQSQSSCEGLEDSCETCLSDIEPGPSDTQEHEGQREAQLQPGYL
NGKRDTLRLSLKETVYETCNKGRTSQSEEVVILPNSKPDLPDVWIKRDGKREDTC
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttgctcgataataggagaaagcacggatgcgatagtgatggatgattctcct
acagatgaaagggaaattcaggaggcttgccaaagcgagatcccggcggtttctctgtgc
cctcctgacagcgagtgctccgccgaggccccgttgacagtcatccagtgtgagggggag
ctgtgtgacagctgcagcagcctcggcagaccctcttcctcctgccagctttatcaccaa
gttccacagggtcctcgaaccagcgcctacgactcaccacagccccgaaaatgcccccac
tgcagccatcacgggccgaacaaactgagcagttgccacgactgtcattcaaacacaacg
ggctctcacgctgagggaggcgcggtggtcaaagtgggacacggctgcagctccagacac
cagacgtcgcgtcacagcgcggtgagatgccactggctgcatgggtcaaacgaaagcggg
gcgcagaagccaacacagagacatgtggtgacagtaagggatggtggactctactgcatc
cttagaaattattcccaggtgatagtggactacccgttagcggtgttggtgggttgtgcc
gtgctgctgctgggatgctcactggctgggcttttcatcggtccacttcctgacttctct
gacccactgctgggttttgagccccggggaacttacattggagttcgccagtccagcttg
tcccagctgcaggagaacactggcccggggaaaactctgtctccattaccacagcagctc
agtaaaagttttggagatgctgtcaatggagacagtggcggcagccaaggcacctccaga
cttcgcattaagaggatgctggccagagactcatctccagacacctttctctgtgatgct
ccaggcgagcgtttggctcagctggtgttccgatcagaaaactcagccagtctctggagc
ctgaaggccatccacgccatgtgtgagatggagcagtccaggattcgctcccaggctcag
ttccaggacctgtgccagcagcatgtgaggatggaggctgagggaacatccagaagtggc
tgttgtccgagctggtctctggggaattatttggctgtcctcactaatgcctcctgctgc
ctcagcctcacctcacaccaggtttctgagtctctgaaccttctacggaagtgtgctctg
tactatcacgagggacatctagtggaagcctgtgtcgacagacctaaacatggcagctgt
tcctctgtcccgtcccgctgcaaacaatcccgcgtggtgtttcagatcctgcacttcctc
gttgataaagactttcttggtccacagactgtagagtaccaaatcccgacgctaaagtac
agcctcctgttcctgcccgtcgacaagggggagcacatgatggagatatacatgaacagt
cttgagggcagggacctgacctacaataacacgactatcactggcatggactttggcatc
aagcagaccctgttcaagcactaccttgcgagagactcagtatatcctgtactagctgtt
gtttgtcttcttttcactatggctctgtatctccactctctcttcatagtagcattatct
gtaataacaatcacaggctccctcctgacctcttacttcttctacaaagtagcatttcgc
ctgactttcttccccctggtcaacctctctgctgctcttattctcttaggaagttgctcc
aatcaggttttcatctttgctgatttctggaatctgcagctatcccagaacccctcggcc
tccctggagaagagagtacacagagctttgcaggaagtcggctatttgattttagcatcc
ggcttgacctcaagtgcagcatttttctctggttatctcagcagcatcacggccatcaga
tgtttctctgtttatctcggaactgcctctctcatcagctcactccttgctttggtgtgg
ctgccatgctctttcgttctgcgggagcgctacacggaggcatcctccgcatctcaagca
gcgcagggatggaaaccatgctgctccaaaaacactggcggcttctgggacacgagctca
cgcaagaaatgcctcttcgctctcggccaaaagctgagagaattaaaacgagggctaacg
gatacctcaaatttattatttctgaaaatcttgccttgtggagtggtaaagtttaggtac
atctgggtgtgctggttcgcggtgctcgcggctggaggcacgtacatgtcctgcgttgac
ccaggcatgaagctgccaagcttagacagcaaggtcacccagcttttccgttccagtcac
ccctttgaaagatacgacgcagagtatcgccacatgtttatgtttgagagacagagaaat
ggagaggataagcccgttacattaatgctcgtatggggtgtcaaaccatcagataacggt
gatcactttgaccctaagagcaatggctctttagttcttgatccaacctttaacatgagc
caaccagatgctcaggtctggttaagggacatttgtggaagagtccagaaccaaagcttc
tattcccctccaccaccggaggatagaaatgttatgacagacaatatctgtcttgtggag
cagttaatacactgggtatctgtcagacggtgctcagagagcgatgacgccctccacttc
tgctgtaatgacatccctttcccctaccctcccagtgtttttgagaactgcctcagtatg
atgctggcagagaggtacactgagggccatctggcccacagtggaggcctgtacttccag
ccagatggcagggtcgctgccctcgtgttggcattcaaaaccacatacctctacagcttc
aacttcagcagaaccagtgttttttacagagaaatcctgacatggtttaacagagaaata
tcaggagcgccgcaggggctggagaacggctggttcatcagtcagctgtctctttttgac
ctacaacagtccttaagctcagagactctggttgtggctggcttctcagtagctctcaca
tttattttgcttcttctaaccacctggaatatcccactgagcatatatgggactatagct
gtaggaggcagcgtgtttgtcacagtcggcctcctggttcttcttgaatggcagctgagc
ggcatcgaggctctgtttatatcatcagcagcagggctgtctgttgactttatagctaat
tactgcatatcctacagcttggctcctcattcagacaaaattgggaaagtagcacactcc
actaaaaggatgggatgccctgtagcaatagtttctggtgcgttcttctccatggggatc
atcatgttgcctgccacagccttgctgttcagaaaactggggattttcctgtttctggtc
aaatgtgtagcatgtggattcgcaaccttctttttccagtccctgtgctgcttttttgga
ccccagaaaaactgcggaaagatcacactgccgtgtttttcagaccagaccgacggcgtg
ctgtcttcgtgctctgcggccgagcctggttcctcctcggctgctaatggggcctttggc
agatctagagtgaggaggagttatgacaaagaagcaggtggctatctctaccccaaccac
cgtcagcatagacagaaacagactggcgggggaggtggaggtgggggcagagggccggag
cagtacgagcttcagccgctggcttatcggctgagcgacagcttcgagaacagcacctgc
accagcaaactgtccaaccggccctccgtgctctctgatgagatcgaatattgtggggaa
gatgttggaggaaacagtgtgaatggggagagtgaggagatgtgcggtcgtcaacataag
atctgccagccacctccagccctccagacttcatctccttacaaagaaaacaccctgcgg
cctgtgggtctggcacaagaggacttcgctaaagacaagctgctgtgtaagacgtgcaga
ggccagtctggcggagtaaagcactgggccaatacatccttctcttcatcctccagcatc
caggagactataaccagccacaccctggagaccactgaccagccatctctctgcaaagag
gaccacgccgcagaggagtgtctccactctcacaaagggcaccgcttctcccagtcacag
agctcctgcgagggtctggaggattcctgtgaaacatgcctcagtgacatcgagcctggg
ccttcagacacacaggaacacgaaggacaaagagaggctcagttacaaccaggataccta
aacgggaagagagacacgcttcgtctctcactgaaagaaactgtttatgagacttgtaat
aagggccgcaccagtcagagtgaagaagtggttattttaccaaacagtaagccagactta
ccagatgtctggataaagagagatggaaaacgagaggatacgtgttga
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integrated database retrieval system
