Lates calcarifer (barramundi perch): 108888169
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Entry
108888169 CDS
T04895
Name
(RefSeq) gem-associated protein 4
KO
K13132
gem associated protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108888169
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108888169
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Paralog
GFIT
Motif
Pfam:
TPR_Edg1
Motif
Other DBs
NCBI-GeneID:
108888169
NCBI-ProteinID:
XP_018539533
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All DBs
Position
LG21:24417213..24423569
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AA seq
1154 aa
AA seq
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MTLMMDKDAAVLQGAFLSANKLCLPSSLSSLQKADWSRVGRSVVETVIEICGLDELRVYP
NTVAGCWKKRIVCVVWLKLLCGQAEEDVETAWRENPFFPLQNGLPEVSHVVLLELVKSLA
AADIFAHFLLCLPQAQVCVELERLTQHVKSSPTGEDDVRLFLEVWWELWKGKNDQRAGRE
EGIEAMFANQFAHLSSKSCSLSPQAAKRLKLDTSAKLASSPTTDVLHILLHALKDIKDHI
STTDLCLQALSISLDSLYTAFLIDQEVILPTKEKMHMLSKAVSIREKNDEKLSPELIQEA
LRDLHASHTPSHFKPSTMRLGEALKIITDLTQFWLNSQLLKVCDSTNFSYSAFKLEQSVQ
RVLTAIEKADVPEAITEMNAQETEKNILRGLLKSLALPAIETTPKVDAEVTMTIINHHLE
DHQNFAVLFASEKSWASCDEQWLDCLEKNQAAFQQHNTLVNLASILMSKLHSESSNVSHC
RKLMKVIADIFSALSLEDKNKSLAAMLKLSTRGFFGHSVPPAVADGFEQELNMAFNCIIQ
GGGGASAAESQGNLNTAASLVARVAFQNPVAALTSCCHSAIFNKGAFTLMAKILQQLPGL
RGQRERNDKTECNGEERKEAEENTDEGKDPLRGSSLLSRCLQDIIKTKSLLASEKEQLVK
FLGRLMMPVMAVDGEERRQCFLSPQEVVNIFVLPNLSTMGHSSCDIELSLQLLHTALCVD
VQDPASSPHWVLDCSPFPLLYILAQLHNQALRFWEQPSEGAVHHWSMDTKELLVSVLTTL
GQVIGAEVAVTPNSWSRALFWLYNKMEELDWTVRFHLKPVWREHFKNEVPSSLLTVCELP
EQEWSALDLPQYSQGSGLLAWMECCSISDSLRSTMLSCLLLDQRQPDHVNMFSKGLLVAL
TQTLPWCSVSQWSRLLGALRELITSGRLHVPFSLEYVDYLPLLDLRRFSCELRLSVLLLR
VLQLLCGSSCSHWLLADGWAHVGRLYAHAVREMMNSVRAKLPLPSSGAWTVSASPPPPKT
PASRDSNPETKAAKLSRDSLKEAEGPPLKSEESQMEEQVETDLSQEVLFVLSQLFCHVQH
IQVMMPGGQCEPLFLASLEILSHYEAIMTGFPDSSTPLESDNTRHFFSTITDNLENQEMK
AVLQQKIAQLVSSS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgacattaatgatggacaaagatgcagctgttcttcagggagctttcctctcagctaac
aagctgtgtctcccctcatccctgtcctcccttcagaaagctgactggagcagggtagga
cgttcagtcgtggagacagtcatagaaatctgtggactggatgaactcagggtttatccc
aacacagtggctggctgctggaaaaagaggatagtctgtgtagtgtggttgaagttgttg
tgcgggcaagctgaggaggatgtagagacagcatggagggagaaccccttcttccctctc
cagaacggcctccctgaggtcagccatgttgtcctgctggagctggtgaagtcactggca
gctgcagatatttttgcccatttcctcctgtgtcttcctcaggctcaggtctgcgttgag
cttgaaaggctgacacaacatgtgaaaagcagcccaactggagaggatgatgtccgactt
tttctggaggtgtggtgggagctgtggaagggcaaaaatgaccagagagcaggacgagag
gaaggcatagaggcaatgtttgccaaccagtttgctcatttgtcctctaagtcctgcagt
ctgtcccctcaggctgccaagaggttaaagctagacacatcagctaaactagcatcatca
ccaaccactgatgtcctccacattctcctccatgcacttaaagacattaaagatcacata
tccacaacagatctctgcctccaggctctctccatttcccttgattctctgtacacagcc
tttctaatagaccaagaagtcatcctcccaactaaagagaagatgcacatgttgtctaaa
gctgtgagcatcagagaaaagaatgatgagaaactgagccctgaacttattcaggaggct
ttgagagacttgcatgcttcccacacaccatctcactttaagcccagcactatgaggctt
ggggaagccttgaagattataacagacctcacacagttttggcttaacagtcagctcctg
aaagtgtgtgacagcactaattttagttactctgcatttaaactagaacaaagtgttcag
agagtcctgacagccatagagaaagcagacgtgcctgaagccataactgaaatgaatgct
caagagactgagaagaatatactcagaggtttgctgaagtccctggctctccctgccata
gagacgactcccaaggtggacgcagaggtcactatgaccatcataaatcaccacttagaa
gaccatcagaactttgctgtgttatttgccagtgaaaagagctgggcctcctgtgatgag
cagtggctggactgcctggaaaagaaccaagcagccttccagcagcacaatactctggtc
aacctggcctccatcctcatgagcaaactccacagtgagagctcaaacgtgagccactgc
aggaagctgatgaaagtcattgcagacattttctcagcgctttcgttagaagacaagaac
aaatccttggctgccatgttgaaattgtccaccagggggttctttgggcattctgttccc
cctgctgtagctgatgggtttgaacaggagctcaacatggcattcaactgcatcatccaa
ggagggggcggggcatcagcagcagagtcgcagggcaatctgaacacagcggcctctttg
gtagcaagagtggcctttcagaacccagtggcggctttgacgtcatgctgtcattcagct
attttcaacaagggggctttcactcttatggctaagatccttcagcagctgcccggactc
agaggacagagggaaagaaatgataaaactgaatgtaatggagaagaaagaaaagaggca
gaggaaaatacagatgaaggaaaggatcctctgcgtggtagcagcctactcagcaggtgt
ctgcaggacataatcaagaccaaatcgttgttggccagtgaaaaagagcagctggtcaag
tttctgggtcggctgatgatgccagttatggcagttgatggagaagaaaggaggcagtgc
tttctgtcacctcaggaggtcgtcaacatcttcgtcctgccaaacctttccactatgggt
cacagttcctgcgatatagaactgagtcttcaacttctccacactgctttgtgtgtggac
gtccaggatccagcctcttctccacactgggtgttggactgctctccctttcccctgctt
tacatcctcgcccagctgcacaaccaggctctcaggttttgggagcagccatcagagggc
gctgtccaccattggtccatggacaccaaggagctgctggtgtctgtgttaaccacactg
gggcaggtgattggtgcagaggtggcggtgacccccaacagctggtccagagctcttttc
tggctctacaacaagatggaggagctggactggacagttaggttccacctgaagcctgtg
tggagggaacactttaaaaatgaagttccctcgtctctgctgacagtgtgtgagttacct
gagcaggagtggtctgctttggacctgcctcagtacagccagggcagtggccttttggcc
tggatggagtgctgctctatatcggactccctgcggtccaccatgttgtcctgtctcttg
ctggaccagcgccagcctgaccacgtcaacatgttcagcaaaggcctgctggtggctctg
acccagactctgccctggtgctccgtctcccagtggtccaggctgctgggagccctgagg
gagctgatcacctccggtcgactccacgtccccttctcacttgagtacgtggattatctg
cccctcctggatctgaggaggttttcatgtgagctccgcctgtcagtcctcctgcttcga
gtccttcagctgctctgtgggtccagctgctcgcactggctgttagcagatggctgggcg
catgttggcaggttatatgcccatgctgtgagggagatgatgaactcagtaagagccaag
ctacctcttccctcatctggtgcttggactgtttctgcttcacctcctcctcctaaaaca
ccagcatctagagactcaaatcctgaaaccaaagctgctaaattgtccagagactctctg
aaagaagcagaaggccctcctctgaaatcagaagagtcacaaatggaagagcaggtggag
acagatctcagccaggaagtcctgtttgttctcagccagctcttctgccatgttcagcac
atccaggtgatgatgccaggaggccagtgtgaaccgctgttcctggccagtttggagatc
ctcagccactacgaagccatcatgactggctttccagacagcagcactccgctggagagc
gacaacacccgacacttcttctccaccatcacagacaacctggagaaccaggagatgaag
gctgtactgcagcagaagatcgctcagcttgtgtcgtcaagctga
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